Merge pull request 'Minor cleanup' (#7) from FEAT-minor-cleanup into master

Reviewed-on: #7

Makefile

@@ -20,7 +20,7 @@ fmt-check:
 check: test lint fmt-check
 
 docker:
-	docker build -t notebook-clone .
+	docker build -t source-sentinel .
 
 hooks:
 	printf '#!/usr/bin/env bash\nset -euo pipefail\nmake check\n' > .git/hooks/pre-commit
@@ -28,12 +28,12 @@ hooks:
 
 dev:
 	@echo "Starting backend and frontend..."
-	cd $(SERVER_DIR) && node src/index.js &
+	cd $(SERVER_DIR) && npx --no-install tsx src/index.ts &
 	cd $(WEB_DIR) && npx --no-install vite --port 5173 &
 	wait
 
 run:
-	cd $(SERVER_DIR) && node src/index.js
+	cd $(SERVER_DIR) && npx --no-install tsx src/index.ts
 
 build:
 	cd $(WEB_DIR) && npx --no-install vite build

README.md

@@ -1,78 +1,156 @@
-# Citation Sentinel
+# Citation Sentinel - 2025 @sjDev - LICENSE: MIT
 
-A source-grounded research assistant that employs cosine similarity scoring for LLM-generated query responses to provide a "groundedness" score. This is a metric in Retrieval-Augmented Generation (RAG) systems that quantifies how well an AI-generated answer is supported by retrieved context. It measures "faithfulness" to source documents, ensuring the answer is not hallucinated or pulled from the model's pre-training data. 
 
-Users upload source documents, or provide links to online sources including audio/video (i.e. links to youtube videos). Users may then ask questions and receive answers (with inline citations) verifiably grounded in the provided information sources. 
+![Citation Sentinel UI showing the source sidebar, natural language answer with citations to the source, and groundedness badge](demo.jpg)
+
+Image one:  source-grounded research assistant for applied use of LLMs. 
+
+**Citation Sentinel leverages multiple Large Language Models for analyzing and conveniently working with large data corpora, when query-result accuracy is of the highest value.  Examples include complex litigation (i.e. Patent/IP), technical medical data exploration (reviewing health records, test results, or studies to find hidden patterns, trends, and answers), advanced LLM development and refinement.**
+
+Citation Sentinel empowers users to transform an otherwise-unmanageably-large corpus of data on any topic of interest into refined, easily-digested subtopics and pose focused inquiries, to instantly receive concise, quantifiably-evaluated, accurate responses.  The system also provides suggested follow-up questions further refining in user inquiries by detecting the query goals.
+
+ALSO NOTE IN DEMO: clickable inline citations (in blue) that take user to source-grounded research basis/knowledge corpus supporting query response, with rated “groundedness” score.
+
+
+# Reliability and Understandability
+
+
+Citation Sentinel's Retrieval-Augmented Generation (RAG) pipeline uses two-stage pass-through to Voyage AI embedding and ranking models, which uses cosine similarity methodology to scoring to evaluate query-source embeddings in multi-dimensional vector space.  This yields  a "groundedness" score.
+
+
+Groundedness metrics quantify how well an AI-generated answer is supported by retrieved context. It measures "faithfulness" to source documents, ensuring the answer is not hallucinated, inaccurate or stale (pulled from the model's training data).
+
+
+# Architecture - Basic Overview
+
+
+Built with a React/Vite frontend and a Typescript/Node/Express backend, using Anthropic Claude for NL response generation, OpenAI Whisper for video audio track transcription, Voyage AI voyage-3 for embeddings and Voyage AI rerank-2 for response cosine similarity scoring (to generate the "groundedness" score) presented as an easily-understandable red/yellow/green "badge" style tooltip in the response (see image above.)
 
-Built with a React/Vite frontend and a Typescript/Node/Express backend, using Anthropic Claude for generation, OpenAI Whisper for video audio track transcription, Voyage AI for embeddings and response cosine similarity scoring (the "groundedness" score).
 
 ## Query pipeline
 
-Source Ingestion -> Parsing -> Chunking -> Embedding (using Voyage AI voyage-3 model) -> Storage (vector store) -> { user query submission } -> Evaluation of User Query -> Retrieval -> Ranking -> Response Generation (Using Anthopic's claude-opus-4-6 model) -> Response Groundedness Scoring (using Voyage AI rerank-r model)
+
+Source Ingestion -> Parsing -> Chunking -> Embedding (using Voyage AI voyage-3 model) -> Storage (vector store) -> { user query submission } -> Evaluation of User Query -> Retrieval -> Ranking -> Response Generation (Using Anthopic's claude-opus-4-6 model) -> Response Groundedness Scoring (using Voyage AI rerank-r model)
+
+## Why Database Math Can't Replace Groundedness Scoring
+
+Many recent additions to the Vector database/store product space use distance metrics (Cosine, L2, Inner Product) for Bi-Encoder Similarity. They compare the vector of the user query against the vectors of chunks independently.
+
+The rerank-r model at the end of the Source Sentinel pipeline performs Cross-Encoder Evaluation, taking two entirely separate text inputs:
+
+1) The generated response from claude-opus-4-6 and 
+
+2) The raw source chunks
+
+It processes them simultaneously through deep attention layers to check for hallucinations, missing context, and factual alignment.
+
+A vector database cosine metric only calculates how close two embeddings are in coordinate space. It **does not read the generated text of a response to verify if it accurately reflects the source chunks**.
 
 ## Prerequisites
 
+
 - **Node.js** (v18+)
-- **yt-dlp** -- required for YouTube video source support (`brew install yt-dlp`)
+- **yt-dlp** -- Required for YouTube video source support (`brew install yt-dlp`)
+
 
 ## Getting Started
 
+
 ```bash
 # clone and install
 git clone <repo-url> && cd citation_sentinel
 cd server && npm install && cd ..
 cd client && npm install && cd ..
 
+
 # configure
 cp server/.env.example server/.env
 # edit server/.env and add your ANTHROPIC_API_KEY, VOYAGE_API_KEY,
 # and optionally OPENAI_API_KEY (only needed for audio source transcription via Whisper)
 
+
 # run
 make dev
 ```
 
+
 ## Rationale
 
+
 This app demonstrates the core source-grounded Q&A pattern with transparent retrieval, generation, and groundedness scoring (LLM response quality cosine scoring) -- all with swappable models and is fully open source.
 
+
 ## Methodology
 
-This application is a RAG (Retrieval-Augmented Generation) system that allows users to upload source documents — PDFs, DOCX files, plain text, audio files, web URLs, and YouTube videos — which are then parsed, split into ~2000-character overlapping chunks, and converted into vector embeddings using Voyage AI's voyage-3 model. Those embeddings are stored in an in-memory vector store.
 
-When a user submits a query, the system enforces groundedness through a multi-layered strategy:
+This is a RAG (Retrieval-Augmented Generation) and query-response source-groundedness assurance system allowing users to create a research knowledge corpus, including:
 
-1. **Retrieval constraint** — The query is embedded (via Voyage AI voyage-3) and compared against
-   stored chunk vectors using cosine similarity, returning the top 20 candidates.
 
-2. **Reranking for precision** — Those 20 candidates are sent to Voyage AI's rerank-2 cross-encoder,
+1. Documents — PDFs, DOCX files, plain text audio files.
-   which re-scores each query-chunk pair with deeper semantic analysis. Only the top 5 survive.
+2. Internet sources: via  web URLs.
+2. Audio sources: i.e. YouTube videos, audio from which is transcribed to text.
 
-3. **Prompt-level constraint** — The top 5 chunks are passed to the "Primary LLM" (Claude opus-4-6).
-   The LLM must cite sources using bracketed indices (e.g., [1], [2]) and admit when sources are
-   insufficient.
 
-4. **Schema enforcement** — The LLM's response is constrained to a JSON schema requiring structured
+These are then parsed, split into ~2000-character overlapping chunks, and converted into vector embeddings using Voyage AI's voyage-3 model.
-   fields (answer, citedSourceIndices, followUpQuestions). Any cited source indices that do not
+
-   correspond to real source groups are programmatically stripped out.
+
+The embeddings are stored in an in-memory vector store.
+
+
+When a user submits a query, the system enforces groundedness through a multi-layered strategy:
+
+
+1. **Retrieval constraint** — The query is embedded (via Voyage AI voyage-3) and compared against stored chunk vectors using cosine similarity, returning the top 20 candidates.
+
+
+2. **Reranking for precision** — Those 20 candidates are sent to Voyage AI's rerank-2 cross-encoder, which re-scores each query-chunk pair with deeper semantic analysis. Only the top 5 survive.
+
+
+3. **Prompt-level constraint** — The top 5 chunks are passed to the "Primary LLM" (Claude opus-4-6) for natural language query response. The Primary LLM must cite sources using bracketed indices (e.g., [1], [2]) and admit when sources are insufficient.
+
+
+4. **Schema enforcement** — The Primary LLM's response is constrained to a JSON schema requiring structured fields (answer, citedSourceIndices, followUpQuestions). Any cited source indices that do not correspond to real source groups are programmatically removed.
+
+
+5. **Post-generation groundedness scoring** — The answer is split into individual sentences. Voyage AI voyage-3 embeds each sentence, and compares it (using cosine similarity) against the vectors of the cited chunks. The similarity is calibrated to a 0–1 scale and averaged, producing a groundedness score surfaced to the user with a visual indicator (“badge” in green/yellow/red).
+
+
+## Similarity Metrics for Semantic Understanding
+
+
+Cosine similarity measures how closely two vectors (representing data like words, images, or preferences) are aligned in a multi-dimensional space by calculating the cosine of the angle between them.
+
+
+Archetypical cosine scores range from -1 to 1.
+
+
+1: Vectors point in the exact same direction (highly similar).
+0: Vectors are at a 90-degree angle (orthogonal/unrelated).
+-1: Vectors point in opposite directions.
+
+
+Cosine distance between high-dimensional text embeddings is compressed: unrelated notes sit close to orthogonal, so both the within-cluster and nearest-cluster distances land near 0.8. In this application, scores are normalized to a bounded range wherein unrelated query-response pair scores are nearly orthogonal.
 
-5. **Post-generation groundedness scoring** — The answer is split into individual sentences. Voyage
-   AI voyage-3 embeds each sentence, and compares it (using cosine similarity) against the vectors
-   of the cited chunks. The similarity is calibrated to a 0–1 scale and averaged, producing a single
-   groundedness score that is surfaced to the user with a visual indicator (green/yellow/red).
 
 ## Design
 
+
 Two-package monorepo:
 
+
 - `server/` -- single Express backend with layered architecture (routes -> services -> stores). Routes orchestrate; services contain business logic; stores manage in-memory state.
 
+
 - `client/` -- React 19 SPA via Vite. Two-panel layout: sidebar for data sources, main area for LLM chat with explorable citations, groundedness badges (cosine similarity scoring of LLM responses), and follow-up question chips.
 
+
 ## License
 
+
 MIT. See [LICENSE](./LICENSE).
 
+
 ## Author
 
-[@sjdev](https://sjdev.co)
+
+@sjdev

client/index.html

@@ -4,7 +4,7 @@
     <meta charset="UTF-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
     <link rel="icon" href="data:image/svg+xml,<svg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 100 100'><circle cx='50' cy='50' r='50' fill='black'/></svg>">
-    <title>NotebookLM Clone</title>
+    <title>Source Sentinel</title>
   </head>
   <body>
     <div id="root"></div>

client/package-lock.json

@@ -1,11 +1,11 @@
 {
-  "name": "notebook-clone-web",
+  "name": "source-sentinel-web",
   "version": "0.1.0",
   "lockfileVersion": 3,
   "requires": true,
   "packages": {
     "": {
-      "name": "notebook-clone-web",
+      "name": "source-sentinel-web",
       "version": "0.1.0",
       "dependencies": {
         "react": "^19.0.0",

client/package.json

@@ -1,5 +1,5 @@
 {
-  "name": "notebook-clone-web",
+  "name": "source-sentinel-web",
   "version": "0.1.0",
   "private": true,
   "engines": { "node": ">=18" },

client/src/App.jsx

@@ -1,20 +1,20 @@
 import { useState } from 'react';
-import NotebookList from './components/NotebookList.jsx';
+import SourceCorpusList from './components/SourceCorpusList.jsx';
 import SourcePanel from './components/SourcePanel.jsx';
 import DocumentButtons from './components/DocumentButtons.jsx';
 import ChatPanel from './components/ChatPanel.jsx';
 import DocumentModal from './components/DocumentModal.jsx';
-import { useNotebook } from './hooks/useNotebook.js';
+import { useSourceCorpus } from './hooks/useSourceCorpus.js';
 import { generateDocument } from './api/documents.js';
 
 function App() {
   const {
-    notebooks,
+    sourceCorpora,
-    activeNotebook,
+    activeSourceCorpus,
-    selectNotebook,
+    selectSourceCorpus,
-    createNotebook,
+    createSourceCorpus,
-    deleteNotebook,
+    deleteSourceCorpus,
-  } = useNotebook();
+  } = useSourceCorpus();
 
   const [hoverState, setHoverState] = useState(null);
   const [sourceCount, setSourceCount] = useState(0);
@@ -22,9 +22,9 @@ function App() {
   const [docModal, setDocModal] = useState({ open: false, type: null, document: null, loading: false });
   const [chatReady, setChatReady] = useState(false);
 
-  const handleSelectNotebook = (id) => {
+  const handleSelectSourceCorpus = (id) => {
     setChatReady(false);
-    selectNotebook(id);
+    selectSourceCorpus(id);
   };
 
   const handleSourceHover = (val) => {
@@ -42,7 +42,7 @@ function App() {
     setDocModal({ open: true, type, document: null, loading: true });
 
     try {
-      const res = await generateDocument(activeNotebook.id, type);
+      const res = await generateDocument(activeSourceCorpus.id, type);
       setDocModal({ open: true, type, document: res.document, loading: false });
     } catch (err) {
       console.error('document generation failed', err);
@@ -58,17 +58,17 @@ function App() {
   return (
     <div className="app">
       <aside className="sidebar">
-        <NotebookList
+        <SourceCorpusList
-          notebooks={notebooks}
+          sourceCorpora={sourceCorpora}
-          activeId={activeNotebook?.id}
+          activeId={activeSourceCorpus?.id}
-          onSelect={handleSelectNotebook}
+          onSelect={handleSelectSourceCorpus}
-          onCreate={createNotebook}
+          onCreate={createSourceCorpus}
-          onDelete={deleteNotebook}
+          onDelete={deleteSourceCorpus}
         />
-        {activeNotebook && (
+        {activeSourceCorpus && (
           <>
             <SourcePanel
-              notebookId={activeNotebook.id}
+              sourceCorpusId={activeSourceCorpus.id}
               hoveredSourceIndex={hoveredDocIndex}
               onSourceHover={handleSourceHover}
               onSourcesChange={setSourceCount}
@@ -85,16 +85,16 @@ function App() {
         )}
       </aside>
       <main className="main">
-        {activeNotebook ? (
+        {activeSourceCorpus ? (
           <ChatPanel
-            notebookId={activeNotebook.id}
+            sourceCorpusId={activeSourceCorpus.id}
             hoveredSource={hoveredInstanceId}
             hoveredDocIndex={hoveredDocIndex}
             onSourceHover={handleSourceHover}
             onFirstResponse={() => setChatReady(true)}
           />
         ) : (
-          <p>Select or create a notebook to get started.</p>
+          <p>Select or create a source corpus to get started.</p>
         )}
       </main>
       <DocumentModal

client/src/api/documents.js

@@ -4,11 +4,11 @@ import { handleResponse } from './client.js';
 
 const BASE = '/api/documents';
 
-export async function generateDocument(notebookId, type) {
+export async function generateDocument(sourceCorpusId, type) {
   const res = await fetch(`${BASE}/generate`, {
     method: 'POST',
     headers: { 'Content-Type': 'application/json' },
-    body: JSON.stringify({ notebookId, type }),
+    body: JSON.stringify({ sourceCorpusId, type }),
   });
   return handleResponse(res);
 }

client/src/api/query.js

@@ -5,11 +5,11 @@ import { handleResponse } from './client.js';
 const BASE = '/api/query';
 const CITATION_DETAIL_BASE = '/api/citation-detail';
 
-export async function sendQuery(notebookId, question, onCitationDetails) {
+export async function sendQuery(sourceCorpusId, question, onCitationDetails) {
   const res = await fetch(BASE, {
     method: 'POST',
     headers: { 'Content-Type': 'application/json' },
-    body: JSON.stringify({ notebookId, question }),
+    body: JSON.stringify({ sourceCorpusId, question }),
   });
   const data = await handleResponse(res);
 

client/src/api/query.test.js

@@ -16,7 +16,7 @@ describe('sendQuery', () => {
     vi.restoreAllMocks();
   });
 
-  it('sends POST to /api/query with notebookId and question', async () => {
+  it('sends POST to /api/query with sourceCorpusId and question', async () => {
     const data = { answer: 'The answer', citations: [] };
     fetch.mockResolvedValue(okResponse(data));
 
@@ -25,7 +25,7 @@ describe('sendQuery', () => {
     expect(fetch).toHaveBeenCalledWith('/api/query', {
       method: 'POST',
       headers: { 'Content-Type': 'application/json' },
-      body: JSON.stringify({ notebookId: 'nb-1', question: 'What is AI?' }),
+      body: JSON.stringify({ sourceCorpusId: 'nb-1', question: 'What is AI?' }),
     });
     expect(result).toEqual(data);
   });

client/src/api/sourceCorpus.js

@@ -2,14 +2,14 @@
 
 import { handleResponse } from './client.js';
 
-const BASE = '/api/notebooks';
+const BASE = '/api/source-corpus';
 
-export async function listNotebooks() {
+export async function listSourceCorpora() {
   const res = await fetch(BASE);
   return handleResponse(res);
 }
 
-export async function createNotebook(name) {
+export async function createSourceCorpus(name) {
   const res = await fetch(BASE, {
     method: 'POST',
     headers: { 'Content-Type': 'application/json' },
@@ -18,7 +18,7 @@ export async function createNotebook(name) {
   return handleResponse(res);
 }
 
-export async function deleteNotebook(id) {
+export async function deleteSourceCorpus(id) {
   const res = await fetch(`${BASE}/${id}`, { method: 'DELETE' });
   return handleResponse(res);
 }

client/src/api/sourceCorpus.test.js

@@ -1,5 +1,5 @@
 import { describe, it, expect, vi, beforeEach, afterEach } from 'vitest';
-import { listNotebooks, createNotebook, deleteNotebook } from './notebooks.js';
+import { listSourceCorpora, createSourceCorpus, deleteSourceCorpus } from './sourceCorpus.js';
 
 const okResponse = (body) => ({
   ok: true,
@@ -7,7 +7,7 @@ const okResponse = (body) => ({
   json: () => Promise.resolve(body),
 });
 
-describe('notebooks API', () => {
+describe('sourceCorpora API', () => {
   beforeEach(() => {
     vi.stubGlobal('fetch', vi.fn());
   });
@@ -16,41 +16,41 @@ describe('notebooks API', () => {
     vi.restoreAllMocks();
   });
 
-  describe('listNotebooks', () => {
+  describe('listSourceCorpora', () => {
-    it('fetches GET /api/notebooks', async () => {
+    it('fetches GET /api/source-corpus', async () => {
       const data = [{ id: '1', name: 'NB' }];
       fetch.mockResolvedValue(okResponse(data));
 
-      const result = await listNotebooks();
+      const result = await listSourceCorpora();
 
-      expect(fetch).toHaveBeenCalledWith('/api/notebooks');
+      expect(fetch).toHaveBeenCalledWith('/api/source-corpus');
       expect(result).toEqual(data);
     });
   });
 
-  describe('createNotebook', () => {
+  describe('createSourceCorpus', () => {
     it('sends POST with name in JSON body', async () => {
-      const nb = { id: '2', name: 'New' };
+      const corpus = { id: '2', name: 'New' };
-      fetch.mockResolvedValue(okResponse(nb));
+      fetch.mockResolvedValue(okResponse(corpus));
 
-      const result = await createNotebook('New');
+      const result = await createSourceCorpus('New');
 
-      expect(fetch).toHaveBeenCalledWith('/api/notebooks', {
+      expect(fetch).toHaveBeenCalledWith('/api/source-corpus', {
         method: 'POST',
         headers: { 'Content-Type': 'application/json' },
         body: JSON.stringify({ name: 'New' }),
       });
-      expect(result).toEqual(nb);
+      expect(result).toEqual(corpus);
     });
   });
 
-  describe('deleteNotebook', () => {
+  describe('deleteSourceCorpus', () => {
-    it('sends DELETE to /api/notebooks/:id', async () => {
+    it('sends DELETE to /api/source-corpus/:id', async () => {
       fetch.mockResolvedValue(okResponse({}));
 
-      await deleteNotebook('abc-123');
+      await deleteSourceCorpus('abc-123');
 
-      expect(fetch).toHaveBeenCalledWith('/api/notebooks/abc-123', {
+      expect(fetch).toHaveBeenCalledWith('/api/source-corpus/abc-123', {
         method: 'DELETE',
       });
     });
@@ -63,6 +63,6 @@ describe('notebooks API', () => {
       json: () => Promise.resolve({ error: 'Server down' }),
     });
 
-    await expect(listNotebooks()).rejects.toThrow('Server down');
+    await expect(listSourceCorpora()).rejects.toThrow('Server down');
   });
 });

client/src/api/sources.js

@@ -4,15 +4,15 @@ import { handleResponse } from './client.js';
 
 const BASE = '/api/sources';
 
-export async function listSources(notebookId) {
+export async function listSources(sourceCorpusId) {
-  const res = await fetch(`${BASE}?notebookId=${notebookId}`);
+  const res = await fetch(`${BASE}?sourceCorpusId=${sourceCorpusId}`);
   return handleResponse(res);
 }
 
-export async function uploadSource(notebookId, file) {
+export async function uploadSource(sourceCorpusId, file) {
   const formData = new FormData();
   formData.append('file', file);
-  formData.append('notebookId', notebookId);
+  formData.append('sourceCorpusId', sourceCorpusId);
   const res = await fetch(BASE, {
     method: 'POST',
     body: formData,
@@ -20,11 +20,11 @@ export async function uploadSource(notebookId, file) {
   return handleResponse(res);
 }
 
-export async function addUrlSource(notebookId, url) {
+export async function addUrlSource(sourceCorpusId, url) {
   const res = await fetch(`${BASE}/url`, {
     method: 'POST',
     headers: { 'Content-Type': 'application/json' },
-    body: JSON.stringify({ notebookId, url }),
+    body: JSON.stringify({ sourceCorpusId, url }),
   });
   return handleResponse(res);
 }

client/src/api/sources.test.js

@@ -17,19 +17,19 @@ describe('sources API', () => {
   });
 
   describe('listSources', () => {
-    it('fetches GET /api/sources with notebookId query param', async () => {
+    it('fetches GET /api/sources with sourceCorpusId query param', async () => {
       const data = [{ id: 's1', name: 'file.pdf' }];
       fetch.mockResolvedValue(okResponse(data));
 
       const result = await listSources('nb-42');
 
-      expect(fetch).toHaveBeenCalledWith('/api/sources?notebookId=nb-42');
+      expect(fetch).toHaveBeenCalledWith('/api/sources?sourceCorpusId=nb-42');
       expect(result).toEqual(data);
     });
   });
 
   describe('uploadSource', () => {
-    it('sends POST with FormData containing file and notebookId', async () => {
+    it('sends POST with FormData containing file and sourceCorpusId', async () => {
       const source = { id: 's2', name: 'doc.pdf' };
       fetch.mockResolvedValue(okResponse(source));
 
@@ -42,7 +42,7 @@ describe('sources API', () => {
       });
 
       const formData = fetch.mock.calls[0][1].body;
-      expect(formData.get('notebookId')).toBe('nb-1');
+      expect(formData.get('sourceCorpusId')).toBe('nb-1');
       expect(formData.get('file')).toBeInstanceOf(File);
       expect(result).toEqual(source);
     });
@@ -58,7 +58,7 @@ describe('sources API', () => {
       expect(fetch).toHaveBeenCalledWith('/api/sources/url', {
         method: 'POST',
         headers: { 'Content-Type': 'application/json' },
-        body: JSON.stringify({ notebookId: 'nb-5', url: 'https://example.com' }),
+        body: JSON.stringify({ sourceCorpusId: 'nb-5', url: 'https://example.com' }),
       });
       expect(result).toEqual(source);
     });

client/src/components/ChatPanel.jsx

@@ -3,7 +3,7 @@ import { sendQuery } from '../api/query.js';
 import ChatMessage from './ChatMessage.jsx';
 import CitationDetailModal from './CitationDetailModal.jsx';
 
-function ChatPanel({ notebookId, hoveredSource, hoveredDocIndex, onSourceHover, onFirstResponse }) {
+function ChatPanel({ sourceCorpusId, hoveredSource, hoveredDocIndex, onSourceHover, onFirstResponse }) {
   const [messages, setMessages] = useState([]);
   const [input, setInput] = useState('');
   const [loading, setLoading] = useState(false);
@@ -18,7 +18,7 @@ function ChatPanel({ notebookId, hoveredSource, hoveredDocIndex, onSourceHover,
     setCitationDetails({});
     setActiveCitation(null);
     firstResponseFired.current = false;
-  }, [notebookId]);
+  }, [sourceCorpusId]);
 
   useEffect(() => {
     bottomRef.current?.scrollIntoView({ behavior: 'smooth' });
@@ -35,7 +35,7 @@ function ChatPanel({ notebookId, hoveredSource, hoveredDocIndex, onSourceHover,
     const msgId = crypto.randomUUID();
 
     try {
-      const res = await sendQuery(notebookId, question, (details) => {
+      const res = await sendQuery(sourceCorpusId, question, (details) => {
         const detailMap = {};
         for (const d of details) {
           detailMap[d.sourceIndex] = d;

client/src/components/CreateNotebookModal.test.jsx

@@ -1,99 +0,0 @@
-import { describe, it, expect, vi } from 'vitest';
-import { render, screen, waitFor } from '@testing-library/react';
-import userEvent from '@testing-library/user-event';
-import CreateNotebookModal from './CreateNotebookModal.jsx';
-
-describe('CreateNotebookModal', () => {
-  it('renders nothing when open is false', () => {
-    const { container } = render(
-      <CreateNotebookModal open={false} onConfirm={() => {}} onCancel={() => {}} />,
-    );
-    expect(container.innerHTML).toBe('');
-  });
-
-  it('renders the modal with title when open', () => {
-    render(<CreateNotebookModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
-    expect(screen.getByText('New Notebook')).toBeInTheDocument();
-  });
-
-  it('renders input and buttons', () => {
-    render(<CreateNotebookModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
-    expect(screen.getByPlaceholderText('Enter notebook name')).toBeInTheDocument();
-    expect(screen.getByText('Cancel')).toBeInTheDocument();
-    expect(screen.getByText('Create')).toBeInTheDocument();
-  });
-
-  it('disables Create button when input is empty', () => {
-    render(<CreateNotebookModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
-    expect(screen.getByText('Create')).toBeDisabled();
-  });
-
-  it('enables Create button when input has text', async () => {
-    const user = userEvent.setup();
-    render(<CreateNotebookModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
-
-    await user.type(screen.getByPlaceholderText('Enter notebook name'), 'My Notebook');
-    expect(screen.getByText('Create')).toBeEnabled();
-  });
-
-  it('calls onConfirm with trimmed name on submit', async () => {
-    const user = userEvent.setup();
-    const onConfirm = vi.fn();
-    render(<CreateNotebookModal open={true} onConfirm={onConfirm} onCancel={() => {}} />);
-
-    await user.type(screen.getByPlaceholderText('Enter notebook name'), '  Research Notes  ');
-    await user.click(screen.getByText('Create'));
-    expect(onConfirm).toHaveBeenCalledWith('Research Notes');
-  });
-
-  it('calls onConfirm on Enter key', async () => {
-    const user = userEvent.setup();
-    const onConfirm = vi.fn();
-    render(<CreateNotebookModal open={true} onConfirm={onConfirm} onCancel={() => {}} />);
-
-    await user.type(screen.getByPlaceholderText('Enter notebook name'), 'Test{Enter}');
-    expect(onConfirm).toHaveBeenCalledWith('Test');
-  });
-
-  it('does not call onConfirm when input is only whitespace', async () => {
-    const user = userEvent.setup();
-    const onConfirm = vi.fn();
-    render(<CreateNotebookModal open={true} onConfirm={onConfirm} onCancel={() => {}} />);
-
-    const input = screen.getByPlaceholderText('Enter notebook name');
-    await user.type(input, '   ');
-    await user.type(input, '{Enter}');
-    expect(onConfirm).not.toHaveBeenCalled();
-  });
-
-  it('calls onCancel when Cancel button is clicked', async () => {
-    const user = userEvent.setup();
-    const onCancel = vi.fn();
-    render(<CreateNotebookModal open={true} onConfirm={() => {}} onCancel={onCancel} />);
-
-    await user.click(screen.getByText('Cancel'));
-    expect(onCancel).toHaveBeenCalledOnce();
-  });
-
-  it('resets input when reopened', async () => {
-    const user = userEvent.setup();
-    const { rerender } = render(
-      <CreateNotebookModal open={true} onConfirm={() => {}} onCancel={() => {}} />,
-    );
-
-    await user.type(screen.getByPlaceholderText('Enter notebook name'), 'Old name');
-
-    rerender(<CreateNotebookModal open={false} onConfirm={() => {}} onCancel={() => {}} />);
-    rerender(<CreateNotebookModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
-
-    expect(screen.getByPlaceholderText('Enter notebook name')).toHaveValue('');
-  });
-
-  it('auto-focuses the input when opened', async () => {
-    render(<CreateNotebookModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
-
-    await waitFor(() => {
-      expect(screen.getByPlaceholderText('Enter notebook name')).toHaveFocus();
-    }, { timeout: 200 });
-  });
-});

client/src/components/CreateSourceCorpusModal.jsx

@@ -1,7 +1,7 @@
 import { useState, useEffect, useRef } from 'react';
 import Modal from './Modal.jsx';
 
-function CreateNotebookModal({ open, onConfirm, onCancel }) {
+function CreateSourceCorpusModal({ open, onConfirm, onCancel }) {
   const [name, setName] = useState('');
   const inputRef = useRef(null);
 
@@ -19,13 +19,13 @@ function CreateNotebookModal({ open, onConfirm, onCancel }) {
   };
 
   return (
-    <Modal open={open} onClose={onCancel} title="New Notebook">
+    <Modal open={open} onClose={onCancel} title="New Source Corpus">
       <form onSubmit={handleSubmit}>
         <input
           ref={inputRef}
           className="modal-input"
           type="text"
-          placeholder="Enter notebook name"
+          placeholder="Enter source corpus name"
           value={name}
           onChange={(e) => setName(e.target.value)}
         />
@@ -50,4 +50,4 @@ function CreateNotebookModal({ open, onConfirm, onCancel }) {
   );
 }
 
-export default CreateNotebookModal;
+export default CreateSourceCorpusModal;

client/src/components/CreateSourceCorpusModal.test.jsx

@@ -0,0 +1,99 @@
+import { describe, it, expect, vi } from 'vitest';
+import { render, screen, waitFor } from '@testing-library/react';
+import userEvent from '@testing-library/user-event';
+import CreateSourceCorpusModal from './CreateSourceCorpusModal.jsx';
+
+describe('CreateSourceCorpusModal', () => {
+  it('renders nothing when open is false', () => {
+    const { container } = render(
+      <CreateSourceCorpusModal open={false} onConfirm={() => {}} onCancel={() => {}} />,
+    );
+    expect(container.innerHTML).toBe('');
+  });
+
+  it('renders the modal with title when open', () => {
+    render(<CreateSourceCorpusModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
+    expect(screen.getByText('New Source Corpus')).toBeInTheDocument();
+  });
+
+  it('renders input and buttons', () => {
+    render(<CreateSourceCorpusModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
+    expect(screen.getByPlaceholderText('Enter source corpus name')).toBeInTheDocument();
+    expect(screen.getByText('Cancel')).toBeInTheDocument();
+    expect(screen.getByText('Create')).toBeInTheDocument();
+  });
+
+  it('disables Create button when input is empty', () => {
+    render(<CreateSourceCorpusModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
+    expect(screen.getByText('Create')).toBeDisabled();
+  });
+
+  it('enables Create button when input has text', async () => {
+    const user = userEvent.setup();
+    render(<CreateSourceCorpusModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
+
+    await user.type(screen.getByPlaceholderText('Enter source corpus name'), 'My SourceCorpus');
+    expect(screen.getByText('Create')).toBeEnabled();
+  });
+
+  it('calls onConfirm with trimmed name on submit', async () => {
+    const user = userEvent.setup();
+    const onConfirm = vi.fn();
+    render(<CreateSourceCorpusModal open={true} onConfirm={onConfirm} onCancel={() => {}} />);
+
+    await user.type(screen.getByPlaceholderText('Enter source corpus name'), '  Research Notes  ');
+    await user.click(screen.getByText('Create'));
+    expect(onConfirm).toHaveBeenCalledWith('Research Notes');
+  });
+
+  it('calls onConfirm on Enter key', async () => {
+    const user = userEvent.setup();
+    const onConfirm = vi.fn();
+    render(<CreateSourceCorpusModal open={true} onConfirm={onConfirm} onCancel={() => {}} />);
+
+    await user.type(screen.getByPlaceholderText('Enter source corpus name'), 'Test{Enter}');
+    expect(onConfirm).toHaveBeenCalledWith('Test');
+  });
+
+  it('does not call onConfirm when input is only whitespace', async () => {
+    const user = userEvent.setup();
+    const onConfirm = vi.fn();
+    render(<CreateSourceCorpusModal open={true} onConfirm={onConfirm} onCancel={() => {}} />);
+
+    const input = screen.getByPlaceholderText('Enter source corpus name');
+    await user.type(input, '   ');
+    await user.type(input, '{Enter}');
+    expect(onConfirm).not.toHaveBeenCalled();
+  });
+
+  it('calls onCancel when Cancel button is clicked', async () => {
+    const user = userEvent.setup();
+    const onCancel = vi.fn();
+    render(<CreateSourceCorpusModal open={true} onConfirm={() => {}} onCancel={onCancel} />);
+
+    await user.click(screen.getByText('Cancel'));
+    expect(onCancel).toHaveBeenCalledOnce();
+  });
+
+  it('resets input when reopened', async () => {
+    const user = userEvent.setup();
+    const { rerender } = render(
+      <CreateSourceCorpusModal open={true} onConfirm={() => {}} onCancel={() => {}} />,
+    );
+
+    await user.type(screen.getByPlaceholderText('Enter source corpus name'), 'Old name');
+
+    rerender(<CreateSourceCorpusModal open={false} onConfirm={() => {}} onCancel={() => {}} />);
+    rerender(<CreateSourceCorpusModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
+
+    expect(screen.getByPlaceholderText('Enter source corpus name')).toHaveValue('');
+  });
+
+  it('auto-focuses the input when opened', async () => {
+    render(<CreateSourceCorpusModal open={true} onConfirm={() => {}} onCancel={() => {}} />);
+
+    await waitFor(() => {
+      expect(screen.getByPlaceholderText('Enter source corpus name')).toHaveFocus();
+    }, { timeout: 200 });
+  });
+});

client/src/components/NotebookList.jsx

@@ -1,53 +0,0 @@
-import { useState } from 'react';
-import CreateNotebookModal from './CreateNotebookModal.jsx';
-
-function NotebookList({ notebooks, activeId, onSelect, onCreate, onDelete }) {
-  const [modalOpen, setModalOpen] = useState(false);
-
-  const handleDelete = (e, id) => {
-    e.stopPropagation();
-    onDelete(id);
-  };
-
-  const handleConfirm = (name) => {
-    setModalOpen(false);
-    onCreate(name);
-  };
-
-  return (
-    <div className="notebook-list">
-      <h2>Notebooks</h2>
-      <ul>
-        {notebooks.map((nb) => (
-          <li
-            key={nb.id}
-            className={nb.id === activeId ? 'active' : ''}
-            onClick={() => onSelect(nb.id)}
-          >
-            <span className="nb-name">{nb.name}</span>
-            <button
-              className="nb-delete"
-              onClick={(e) => handleDelete(e, nb.id)}
-              title="Delete notebook"
-            >
-              &times;
-            </button>
-          </li>
-        ))}
-      </ul>
-      <button
-        className="btn-new-notebook"
-        onClick={() => setModalOpen(true)}
-      >
-        + New Notebook
-      </button>
-      <CreateNotebookModal
-        open={modalOpen}
-        onConfirm={handleConfirm}
-        onCancel={() => setModalOpen(false)}
-      />
-    </div>
-  );
-}
-
-export default NotebookList;

client/src/components/SourceCorpusList.jsx

@@ -0,0 +1,53 @@
+import { useState } from 'react';
+import CreateSourceCorpusModal from './CreateSourceCorpusModal.jsx';
+
+function SourceCorpusList({ sourceCorpora, activeId, onSelect, onCreate, onDelete }) {
+  const [modalOpen, setModalOpen] = useState(false);
+
+  const handleDelete = (e, id) => {
+    e.stopPropagation();
+    onDelete(id);
+  };
+
+  const handleConfirm = (name) => {
+    setModalOpen(false);
+    onCreate(name);
+  };
+
+  return (
+    <div className="source-corpus-list">
+      <h2>Source Corpora</h2>
+      <ul>
+        {sourceCorpora.map((corpus) => (
+          <li
+            key={corpus.id}
+            className={corpus.id === activeId ? 'active' : ''}
+            onClick={() => onSelect(corpus.id)}
+          >
+            <span className="sc-name">{corpus.name}</span>
+            <button
+              className="sc-delete"
+              onClick={(e) => handleDelete(e, corpus.id)}
+              title="Delete source corpus"
+            >
+              &times;
+            </button>
+          </li>
+        ))}
+      </ul>
+      <button
+        className="btn-new-corpus"
+        onClick={() => setModalOpen(true)}
+      >
+        + New Source Corpus
+      </button>
+      <CreateSourceCorpusModal
+        open={modalOpen}
+        onConfirm={handleConfirm}
+        onCancel={() => setModalOpen(false)}
+      />
+    </div>
+  );
+}
+
+export default SourceCorpusList;

client/src/components/SourcePanel.jsx

@@ -10,7 +10,7 @@ function isFileAllowed(file) {
   return ALLOWED_EXTENSIONS.includes(ext);
 }
 
-function SourcePanel({ notebookId, hoveredSourceIndex, onSourceHover, onSourcesChange, children }) {
+function SourcePanel({ sourceCorpusId, hoveredSourceIndex, onSourceHover, onSourcesChange, children }) {
   const [sources, setSources] = useState([]);
   const [uploading, setUploading] = useState(false);
   const [isDragging, setIsDragging] = useState(false);
@@ -30,11 +30,11 @@ function SourcePanel({ notebookId, hoveredSourceIndex, onSourceHover, onSourcesC
   useEffect(() => {
     setSources([]);
     onSourcesChange?.(0);
-    sourcesApi.listSources(notebookId).then((s) => {
+    sourcesApi.listSources(sourceCorpusId).then((s) => {
       setSources(s);
       onSourcesChange?.(s.length);
     }).catch((err) => showError(err.message || 'Failed to load sources'));
-  }, [notebookId, onSourcesChange]);
+  }, [sourceCorpusId, onSourcesChange]);
 
   useEffect(() => () => clearTimeout(errorTimer.current), []);
 
@@ -47,7 +47,7 @@ function SourcePanel({ notebookId, hoveredSourceIndex, onSourceHover, onSourcesC
     setError(null);
     setUploading(true);
     try {
-      const src = await sourcesApi.uploadSource(notebookId, file);
+      const src = await sourcesApi.uploadSource(sourceCorpusId, file);
       setSources((prev) => {
         const next = [...prev, src];
         onSourcesChange?.(next.length);
@@ -72,7 +72,7 @@ function SourcePanel({ notebookId, hoveredSourceIndex, onSourceHover, onSourcesC
     setError(null);
     setAddingUrl(true);
     try {
-      const src = await sourcesApi.addUrlSource(notebookId, url);
+      const src = await sourcesApi.addUrlSource(sourceCorpusId, url);
       if (src.error) {
         showError(src.error);
       } else {

client/src/hooks/useNotebook.js

@@ -1,50 +0,0 @@
-import { useState, useEffect, useCallback } from 'react';
-import * as notebooksApi from '../api/notebooks.js';
-
-export function useNotebook() {
-  const [notebooks, setNotebooks] = useState([]);
-  const [activeNotebook, setActiveNotebook] = useState(null);
-
-  useEffect(() => {
-    notebooksApi.listNotebooks().then(setNotebooks).catch(console.error);
-  }, []);
-
-  const selectNotebook = useCallback(
-    (id) => {
-      const nb = notebooks.find((n) => n.id === id) || null;
-      setActiveNotebook(nb);
-    },
-    [notebooks],
-  );
-
-  const createNotebook = useCallback(async (name) => {
-    if (!name) return;
-    const nb = await notebooksApi.createNotebook(name);
-    setNotebooks((prev) => [...prev, nb]);
-    setActiveNotebook(nb);
-  }, []);
-
-  const deleteNotebook = useCallback(
-    async (id) => {
-      try {
-        await notebooksApi.deleteNotebook(id);
-      } catch (err) {
-        console.error('Failed to delete notebook', err);
-        return;
-      }
-      setNotebooks((prev) => prev.filter((n) => n.id !== id));
-      if (activeNotebook?.id === id) {
-        setActiveNotebook(null);
-      }
-    },
-    [activeNotebook],
-  );
-
-  return {
-    notebooks,
-    activeNotebook,
-    selectNotebook,
-    createNotebook,
-    deleteNotebook,
-  };
-}

client/src/hooks/useNotebook.test.js

@@ -1,176 +0,0 @@
-import { describe, it, expect, vi, beforeEach } from 'vitest';
-import { renderHook, act, waitFor } from '@testing-library/react';
-
-vi.mock('../api/notebooks.js', () => ({
-  listNotebooks: vi.fn(),
-  createNotebook: vi.fn(),
-  deleteNotebook: vi.fn(),
-}));
-
-import { useNotebook } from './useNotebook.js';
-import * as notebooksApi from '../api/notebooks.js';
-
-const notebooks = [
-  { id: 'nb-1', name: 'Research' },
-  { id: 'nb-2', name: 'Personal' },
-];
-
-beforeEach(() => {
-  vi.resetAllMocks();
-  notebooksApi.listNotebooks.mockResolvedValue(notebooks);
-  notebooksApi.createNotebook.mockImplementation(async (name) => ({
-    id: `nb-${Date.now()}`,
-    name,
-  }));
-  notebooksApi.deleteNotebook.mockResolvedValue({});
-});
-
-describe('useNotebook', () => {
-  it('loads notebooks on mount', async () => {
-    const { result } = renderHook(() => useNotebook());
-
-    await waitFor(() => {
-      expect(result.current.notebooks).toEqual(notebooks);
-    });
-    expect(notebooksApi.listNotebooks).toHaveBeenCalledOnce();
-  });
-
-  it('starts with no active notebook', () => {
-    const { result } = renderHook(() => useNotebook());
-    expect(result.current.activeNotebook).toBeNull();
-  });
-
-  it('selectNotebook sets the active notebook', async () => {
-    const { result } = renderHook(() => useNotebook());
-
-    await waitFor(() => {
-      expect(result.current.notebooks).toHaveLength(2);
-    });
-
-    act(() => {
-      result.current.selectNotebook('nb-2');
-    });
-
-    expect(result.current.activeNotebook).toEqual({ id: 'nb-2', name: 'Personal' });
-  });
-
-  it('selectNotebook sets null for unknown id', async () => {
-    const { result } = renderHook(() => useNotebook());
-
-    await waitFor(() => {
-      expect(result.current.notebooks).toHaveLength(2);
-    });
-
-    act(() => {
-      result.current.selectNotebook('nb-2');
-    });
-    expect(result.current.activeNotebook).not.toBeNull();
-
-    act(() => {
-      result.current.selectNotebook('nonexistent');
-    });
-    expect(result.current.activeNotebook).toBeNull();
-  });
-
-  it('createNotebook calls API and adds to list', async () => {
-    const newNb = { id: 'nb-new', name: 'New One' };
-    notebooksApi.createNotebook.mockResolvedValue(newNb);
-
-    const { result } = renderHook(() => useNotebook());
-    await waitFor(() => expect(result.current.notebooks).toHaveLength(2));
-
-    await act(async () => {
-      await result.current.createNotebook('New One');
-    });
-
-    expect(notebooksApi.createNotebook).toHaveBeenCalledWith('New One');
-    expect(result.current.notebooks).toHaveLength(3);
-    expect(result.current.notebooks[2]).toEqual(newNb);
-    expect(result.current.activeNotebook).toEqual(newNb);
-  });
-
-  it('createNotebook does nothing for empty name', async () => {
-    const { result } = renderHook(() => useNotebook());
-    await waitFor(() => expect(result.current.notebooks).toHaveLength(2));
-
-    await act(async () => {
-      await result.current.createNotebook('');
-    });
-
-    expect(notebooksApi.createNotebook).not.toHaveBeenCalled();
-    expect(result.current.notebooks).toHaveLength(2);
-  });
-
-  it('deleteNotebook removes from list', async () => {
-    const { result } = renderHook(() => useNotebook());
-    await waitFor(() => expect(result.current.notebooks).toHaveLength(2));
-
-    await act(async () => {
-      await result.current.deleteNotebook('nb-1');
-    });
-
-    expect(notebooksApi.deleteNotebook).toHaveBeenCalledWith('nb-1');
-    expect(result.current.notebooks).toHaveLength(1);
-    expect(result.current.notebooks[0].id).toBe('nb-2');
-  });
-
-  it('deleteNotebook clears activeNotebook if it was the deleted one', async () => {
-    const { result } = renderHook(() => useNotebook());
-    await waitFor(() => expect(result.current.notebooks).toHaveLength(2));
-
-    act(() => {
-      result.current.selectNotebook('nb-1');
-    });
-    expect(result.current.activeNotebook?.id).toBe('nb-1');
-
-    await act(async () => {
-      await result.current.deleteNotebook('nb-1');
-    });
-
-    expect(result.current.activeNotebook).toBeNull();
-  });
-
-  it('deleteNotebook preserves activeNotebook if different one deleted', async () => {
-    const { result } = renderHook(() => useNotebook());
-    await waitFor(() => expect(result.current.notebooks).toHaveLength(2));
-
-    act(() => {
-      result.current.selectNotebook('nb-2');
-    });
-
-    await act(async () => {
-      await result.current.deleteNotebook('nb-1');
-    });
-
-    expect(result.current.activeNotebook).toEqual({ id: 'nb-2', name: 'Personal' });
-  });
-
-  it('deleteNotebook does not remove from list on API error', async () => {
-    notebooksApi.deleteNotebook.mockRejectedValue(new Error('Server error'));
-    vi.spyOn(console, 'error').mockImplementation(() => {});
-
-    const { result } = renderHook(() => useNotebook());
-    await waitFor(() => expect(result.current.notebooks).toHaveLength(2));
-
-    await act(async () => {
-      await result.current.deleteNotebook('nb-1');
-    });
-
-    expect(result.current.notebooks).toHaveLength(2);
-    console.error.mockRestore();
-  });
-
-  it('handles listNotebooks API failure gracefully', async () => {
-    notebooksApi.listNotebooks.mockRejectedValue(new Error('Network error'));
-    vi.spyOn(console, 'error').mockImplementation(() => {});
-
-    const { result } = renderHook(() => useNotebook());
-
-    await waitFor(() => {
-      expect(notebooksApi.listNotebooks).toHaveBeenCalled();
-    });
-
-    expect(result.current.notebooks).toEqual([]);
-    console.error.mockRestore();
-  });
-});

client/src/hooks/useSourceCorpus.js

@@ -0,0 +1,50 @@
+import { useState, useEffect, useCallback } from 'react';
+import * as sourceCorpusApi from '../api/sourceCorpus.js';
+
+export function useSourceCorpus() {
+  const [sourceCorpora, setSourceCorpora] = useState([]);
+  const [activeSourceCorpus, setActiveSourceCorpus] = useState(null);
+
+  useEffect(() => {
+    sourceCorpusApi.listSourceCorpora().then(setSourceCorpora).catch(console.error);
+  }, []);
+
+  const selectSourceCorpus = useCallback(
+    (id) => {
+      const corpus = sourceCorpora.find((n) => n.id === id) || null;
+      setActiveSourceCorpus(corpus);
+    },
+    [sourceCorpora],
+  );
+
+  const createSourceCorpus = useCallback(async (name) => {
+    if (!name) return;
+    const corpus = await sourceCorpusApi.createSourceCorpus(name);
+    setSourceCorpora((prev) => [...prev, corpus]);
+    setActiveSourceCorpus(corpus);
+  }, []);
+
+  const deleteSourceCorpus = useCallback(
+    async (id) => {
+      try {
+        await sourceCorpusApi.deleteSourceCorpus(id);
+      } catch (err) {
+        console.error('Failed to delete sourceCorpus', err);
+        return;
+      }
+      setSourceCorpora((prev) => prev.filter((n) => n.id !== id));
+      if (activeSourceCorpus?.id === id) {
+        setActiveSourceCorpus(null);
+      }
+    },
+    [activeSourceCorpus],
+  );
+
+  return {
+    sourceCorpora,
+    activeSourceCorpus,
+    selectSourceCorpus,
+    createSourceCorpus,
+    deleteSourceCorpus,
+  };
+}

client/src/hooks/useSourceCorpus.test.js

@@ -0,0 +1,176 @@
+import { describe, it, expect, vi, beforeEach } from 'vitest';
+import { renderHook, act, waitFor } from '@testing-library/react';
+
+vi.mock('../api/sourceCorpus.js', () => ({
+  listSourceCorpora: vi.fn(),
+  createSourceCorpus: vi.fn(),
+  deleteSourceCorpus: vi.fn(),
+}));
+
+import { useSourceCorpus } from './useSourceCorpus.js';
+import * as sourceCorpusApi from '../api/sourceCorpus.js';
+
+const sourceCorpora = [
+  { id: 'nb-1', name: 'Research' },
+  { id: 'nb-2', name: 'Personal' },
+];
+
+beforeEach(() => {
+  vi.resetAllMocks();
+  sourceCorpusApi.listSourceCorpora.mockResolvedValue(sourceCorpora);
+  sourceCorpusApi.createSourceCorpus.mockImplementation(async (name) => ({
+    id: `nb-${Date.now()}`,
+    name,
+  }));
+  sourceCorpusApi.deleteSourceCorpus.mockResolvedValue({});
+});
+
+describe('useSourceCorpus', () => {
+  it('loads sourceCorpora on mount', async () => {
+    const { result } = renderHook(() => useSourceCorpus());
+
+    await waitFor(() => {
+      expect(result.current.sourceCorpora).toEqual(sourceCorpora);
+    });
+    expect(sourceCorpusApi.listSourceCorpora).toHaveBeenCalledOnce();
+  });
+
+  it('starts with no active sourceCorpus', () => {
+    const { result } = renderHook(() => useSourceCorpus());
+    expect(result.current.activeSourceCorpus).toBeNull();
+  });
+
+  it('selectSourceCorpus sets the active sourceCorpus', async () => {
+    const { result } = renderHook(() => useSourceCorpus());
+
+    await waitFor(() => {
+      expect(result.current.sourceCorpora).toHaveLength(2);
+    });
+
+    act(() => {
+      result.current.selectSourceCorpus('nb-2');
+    });
+
+    expect(result.current.activeSourceCorpus).toEqual({ id: 'nb-2', name: 'Personal' });
+  });
+
+  it('selectSourceCorpus sets null for unknown id', async () => {
+    const { result } = renderHook(() => useSourceCorpus());
+
+    await waitFor(() => {
+      expect(result.current.sourceCorpora).toHaveLength(2);
+    });
+
+    act(() => {
+      result.current.selectSourceCorpus('nb-2');
+    });
+    expect(result.current.activeSourceCorpus).not.toBeNull();
+
+    act(() => {
+      result.current.selectSourceCorpus('nonexistent');
+    });
+    expect(result.current.activeSourceCorpus).toBeNull();
+  });
+
+  it('createSourceCorpus calls API and adds to list', async () => {
+    const newCorpus = { id: 'nb-new', name: 'New One' };
+    sourceCorpusApi.createSourceCorpus.mockResolvedValue(newCorpus);
+
+    const { result } = renderHook(() => useSourceCorpus());
+    await waitFor(() => expect(result.current.sourceCorpora).toHaveLength(2));
+
+    await act(async () => {
+      await result.current.createSourceCorpus('New One');
+    });
+
+    expect(sourceCorpusApi.createSourceCorpus).toHaveBeenCalledWith('New One');
+    expect(result.current.sourceCorpora).toHaveLength(3);
+    expect(result.current.sourceCorpora[2]).toEqual(newCorpus);
+    expect(result.current.activeSourceCorpus).toEqual(newCorpus);
+  });
+
+  it('createSourceCorpus does nothing for empty name', async () => {
+    const { result } = renderHook(() => useSourceCorpus());
+    await waitFor(() => expect(result.current.sourceCorpora).toHaveLength(2));
+
+    await act(async () => {
+      await result.current.createSourceCorpus('');
+    });
+
+    expect(sourceCorpusApi.createSourceCorpus).not.toHaveBeenCalled();
+    expect(result.current.sourceCorpora).toHaveLength(2);
+  });
+
+  it('deleteSourceCorpus removes from list', async () => {
+    const { result } = renderHook(() => useSourceCorpus());
+    await waitFor(() => expect(result.current.sourceCorpora).toHaveLength(2));
+
+    await act(async () => {
+      await result.current.deleteSourceCorpus('nb-1');
+    });
+
+    expect(sourceCorpusApi.deleteSourceCorpus).toHaveBeenCalledWith('nb-1');
+    expect(result.current.sourceCorpora).toHaveLength(1);
+    expect(result.current.sourceCorpora[0].id).toBe('nb-2');
+  });
+
+  it('deleteSourceCorpus clears activeSourceCorpus if it was the deleted one', async () => {
+    const { result } = renderHook(() => useSourceCorpus());
+    await waitFor(() => expect(result.current.sourceCorpora).toHaveLength(2));
+
+    act(() => {
+      result.current.selectSourceCorpus('nb-1');
+    });
+    expect(result.current.activeSourceCorpus?.id).toBe('nb-1');
+
+    await act(async () => {
+      await result.current.deleteSourceCorpus('nb-1');
+    });
+
+    expect(result.current.activeSourceCorpus).toBeNull();
+  });
+
+  it('deleteSourceCorpus preserves activeSourceCorpus if different one deleted', async () => {
+    const { result } = renderHook(() => useSourceCorpus());
+    await waitFor(() => expect(result.current.sourceCorpora).toHaveLength(2));
+
+    act(() => {
+      result.current.selectSourceCorpus('nb-2');
+    });
+
+    await act(async () => {
+      await result.current.deleteSourceCorpus('nb-1');
+    });
+
+    expect(result.current.activeSourceCorpus).toEqual({ id: 'nb-2', name: 'Personal' });
+  });
+
+  it('deleteSourceCorpus does not remove from list on API error', async () => {
+    sourceCorpusApi.deleteSourceCorpus.mockRejectedValue(new Error('Server error'));
+    vi.spyOn(console, 'error').mockImplementation(() => {});
+
+    const { result } = renderHook(() => useSourceCorpus());
+    await waitFor(() => expect(result.current.sourceCorpora).toHaveLength(2));
+
+    await act(async () => {
+      await result.current.deleteSourceCorpus('nb-1');
+    });
+
+    expect(result.current.sourceCorpora).toHaveLength(2);
+    console.error.mockRestore();
+  });
+
+  it('handles listSourceCorpora API failure gracefully', async () => {
+    sourceCorpusApi.listSourceCorpora.mockRejectedValue(new Error('Network error'));
+    vi.spyOn(console, 'error').mockImplementation(() => {});
+
+    const { result } = renderHook(() => useSourceCorpus());
+
+    await waitFor(() => {
+      expect(sourceCorpusApi.listSourceCorpora).toHaveBeenCalled();
+    });
+
+    expect(result.current.sourceCorpora).toEqual([]);
+    console.error.mockRestore();
+  });
+});

client/src/index.css

@@ -75,14 +75,14 @@ body {
   font-size: 16px;
 }
 
-/* ── Notebook List ─────────────────────────────────── */
+/* ── SourceCorpus List ─────────────────────────────────── */
 
-.notebook-list {
+.source-corpus-list {
   padding: 20px 16px 12px;
   border-bottom: 1px solid rgba(255, 255, 255, 0.08);
 }
 
-.notebook-list h2 {
+.source-corpus-list h2 {
   font-size: 11px;
   font-weight: 600;
   text-transform: uppercase;
@@ -91,12 +91,12 @@ body {
   margin-bottom: 12px;
 }
 
-.notebook-list ul {
+.source-corpus-list ul {
   list-style: none;
   margin-bottom: 8px;
 }
 
-.notebook-list li {
+.source-corpus-list li {
   display: flex;
   align-items: center;
   justify-content: space-between;
@@ -107,23 +107,23 @@ body {
   transition: background 0.15s;
 }
 
-.notebook-list li:hover {
+.source-corpus-list li:hover {
   background: var(--sidebar-hover);
 }
 
-.notebook-list li.active {
+.source-corpus-list li.active {
   background: var(--sidebar-active);
   color: #fff;
   font-weight: 500;
 }
 
-.notebook-list li .nb-name {
+.source-corpus-list li .sc-name {
   overflow: hidden;
   text-overflow: ellipsis;
   white-space: nowrap;
 }
 
-.notebook-list li .nb-delete {
+.source-corpus-list li .sc-delete {
   opacity: 0;
   background: none;
   border: none;
@@ -135,15 +135,15 @@ body {
   transition: opacity 0.15s, color 0.15s;
 }
 
-.notebook-list li:hover .nb-delete {
+.source-corpus-list li:hover .sc-delete {
   opacity: 1;
 }
 
-.notebook-list li .nb-delete:hover {
+.source-corpus-list li .sc-delete:hover {
   color: var(--danger);
 }
 
-.btn-new-notebook {
+.btn-new-corpus {
   width: 100%;
   padding: 8px;
   border: 1px dashed rgba(255, 255, 255, 0.2);
@@ -155,7 +155,7 @@ body {
   transition: border-color 0.15s, color 0.15s;
 }
 
-.btn-new-notebook:hover {
+.btn-new-corpus:hover {
   border-color: rgba(255, 255, 255, 0.5);
   color: #fff;
 }

server/package-lock.json

@@ -1,11 +1,11 @@
 {
-  "name": "notebook-clone-server",
+  "name": "source-sentinel-server",
   "version": "0.1.0",
   "lockfileVersion": 3,
   "requires": true,
   "packages": {
     "": {
-      "name": "notebook-clone-server",
+      "name": "source-sentinel-server",
       "version": "0.1.0",
       "dependencies": {
         "@anthropic-ai/sdk": "^0.78.0",

server/package.json

@@ -1,5 +1,5 @@
 {
-  "name": "notebook-clone-server",
+  "name": "source-sentinel-server",
   "version": "0.1.0",
   "private": true,
   "engines": {

server/src/index.ts

@@ -4,7 +4,7 @@ import 'dotenv/config';
 import express, { type Request, type Response, type NextFunction } from 'express';
 import cors from 'cors';
 import logger from './logger.js';
-import notebookRoutes from './routes/notebooks.js';
+import sourceCorpusRoutes from './routes/sourceCorpus.js';
 import sourceRoutes from './routes/sources.js';
 import queryRoutes from './routes/query.js';
 import citationDetailRoutes from './routes/citationDetail.js';
@@ -39,13 +39,13 @@ app.use((req: Request, res: Response, next: NextFunction) => {
 
 app.get('/.well-known/healthcheck', (_req: Request, res: Response) => {
   res.json({
-    service: 'notebook-clone',
+    service: 'source-sentinel',
     status: 'ok',
     uptime: process.uptime(),
   });
 });
 
-app.use('/api/notebooks', notebookRoutes);
+app.use('/api/source-corpus', sourceCorpusRoutes);
 app.use('/api/sources', sourceRoutes);
 app.use('/api/query', queryRoutes);
 app.use('/api/citation-detail', citationDetailRoutes);

server/src/middleware/validation.ts

@@ -1,31 +1,31 @@
 'use strict';
 
 import type { Request, Response, NextFunction } from 'express';
-import * as notebookStore from '../stores/notebookStore.js';
+import * as sourceCorpusStore from '../stores/sourceCorpusStore.js';
-import type { Notebook } from '../stores/notebookStore.js';
+import type { SourceCorpus } from '../stores/sourceCorpusStore.js';
 
-export interface NotebookRequest extends Request {
+export interface SourceCorpusRequest extends Request {
-  notebookId?: string;
+  sourceCorpusId?: string;
-  notebook?: Notebook;
+  sourceCorpus?: SourceCorpus;
 }
 
-export function requireNotebookId(req: NotebookRequest, res: Response, next: NextFunction): void {
+export function requireSourceCorpusId(req: SourceCorpusRequest, res: Response, next: NextFunction): void {
-  const notebookId = (req.body?.notebookId ?? req.query?.notebookId) as string | undefined;
+  const sourceCorpusId = (req.body?.sourceCorpusId ?? req.query?.sourceCorpusId) as string | undefined;
-  if (!notebookId) {
+  if (!sourceCorpusId) {
-    res.status(400).json({ error: 'notebookId is required' });
+    res.status(400).json({ error: 'sourceCorpusId is required' });
     return;
   }
-  req.notebookId = notebookId;
+  req.sourceCorpusId = sourceCorpusId;
   next();
 }
 
-export function requireNotebook(req: NotebookRequest, res: Response, next: NextFunction): void {
+export function requireSourceCorpus(req: SourceCorpusRequest, res: Response, next: NextFunction): void {
-  const notebook = notebookStore.getNotebook(req.notebookId!);
+  const sourceCorpus = sourceCorpusStore.getSourceCorpus(req.sourceCorpusId!);
-  if (!notebook) {
+  if (!sourceCorpus) {
-    res.status(404).json({ error: 'notebook not found' });
+    res.status(404).json({ error: 'source corpus not found' });
     return;
   }
-  req.notebook = notebook;
+  req.sourceCorpus = sourceCorpus;
   next();
 }
 

server/src/routes/documents.ts

@@ -2,8 +2,8 @@
 
 import { Router, type Request, type Response, type NextFunction } from 'express';
 import logger from '../logger.js';
-import * as notebookStore from '../stores/notebookStore.js';
+import * as sourceCorpusStore from '../stores/sourceCorpusStore.js';
-import type { TextChunk, Source, SourceGroup } from '../stores/notebookStore.js';
+import type { TextChunk, Source, SourceGroup } from '../stores/sourceCorpusStore.js';
 import * as documentCacheStore from '../stores/documentCacheStore.js';
 import type { CacheEntry } from '../stores/documentCacheStore.js';
 import {
@@ -27,16 +27,16 @@ const GENERATORS: Record<DocumentType, GeneratorFn> = {
 const router = Router();
 
 interface GenerateBody {
-  notebookId?: string;
+  sourceCorpusId?: string;
   type?: string;
 }
 
 router.post('/generate', async (req: Request<unknown, unknown, GenerateBody>, res: Response, next: NextFunction) => {
   try {
-    const { notebookId, type } = req.body;
+    const { sourceCorpusId, type } = req.body;
 
-    if (!notebookId || !type) {
+    if (!sourceCorpusId || !type) {
-      res.status(400).json({ error: 'notebookId and type are required' });
+      res.status(400).json({ error: 'sourceCorpusId and type are required' });
       return;
     }
 
@@ -48,31 +48,31 @@ router.post('/generate', async (req: Request<unknown, unknown, GenerateBody>, re
       return;
     }
 
-    const chunks: TextChunk[] = notebookStore.getChunksForNotebook(notebookId);
+    const chunks: TextChunk[] = sourceCorpusStore.getChunksForSourceCorpus(sourceCorpusId);
     if (chunks.length === 0) {
-      res.status(422).json({ error: 'No source material available in this notebook' });
+      res.status(422).json({ error: 'No source material available in this source corpus' });
       return;
     }
 
-    const sources: Source[] = notebookStore.getSources(notebookId);
+    const sources: Source[] = sourceCorpusStore.getSources(sourceCorpusId);
-    const cached: CacheEntry | null = documentCacheStore.getCachedDocument(notebookId, type);
+    const cached: CacheEntry | null = documentCacheStore.getCachedDocument(sourceCorpusId, type);
-    if (cached && documentCacheStore.isFresh(notebookId, type, sources)) {
+    if (cached && documentCacheStore.isFresh(sourceCorpusId, type, sources)) {
-      logger.info({ notebookId, type }, 'serving cached document');
+      logger.info({ sourceCorpusId, type }, 'serving cached document');
       res.json({ type, document: cached.document });
       return;
     }
 
-    const sourceGroups: SourceGroup[] = notebookStore.buildSourceGroups(notebookId, chunks);
+    const sourceGroups: SourceGroup[] = sourceCorpusStore.buildSourceGroups(sourceCorpusId, chunks);
 
     logger.info(
-      { notebookId, type, sourceCount: sourceGroups.length, chunkCount: chunks.length },
+      { sourceCorpusId, type, sourceCount: sourceGroups.length, chunkCount: chunks.length },
       'document generation started'
     );
 
     const document: StudyGuide | Faq | ExecutiveBrief = await generator(sourceGroups);
 
-    documentCacheStore.setCachedDocument(notebookId, type, document, sources);
+    documentCacheStore.setCachedDocument(sourceCorpusId, type, document, sources);
-    logger.info({ notebookId, type }, 'document generation complete');
+    logger.info({ sourceCorpusId, type }, 'document generation complete');
 
     res.json({ type, document });
   } catch (err) {

server/src/routes/query.ts

@@ -7,8 +7,8 @@ import type { ScoredChunk, RankedChunk, TextChunk } from '../services/retrievalS
 import { generate } from '../services/generationService.js';
 import type { GenerationResult } from '../services/generationService.js';
 import { computeGroundedness } from '../services/scoringService.js';
-import * as notebookStore from '../stores/notebookStore.js';
+import * as sourceCorpusStore from '../stores/sourceCorpusStore.js';
-import type { SourceGroup } from '../stores/notebookStore.js';
+import type { SourceGroup } from '../stores/sourceCorpusStore.js';
 
 const TOP_K_SEARCH = 20;
 const TOP_K_RERANK = 5;
@@ -16,7 +16,7 @@ const TOP_K_RERANK = 5;
 const router = Router();
 
 interface QueryBody {
-  notebookId?: string;
+  sourceCorpusId?: string;
   question?: string;
 }
 
@@ -36,20 +36,20 @@ interface QueryResponse {
 
 router.post('/', async (req: Request<unknown, unknown, QueryBody>, res: Response, next: NextFunction) => {
   try {
-    const { notebookId, question } = req.body;
+    const { sourceCorpusId, question } = req.body;
-    if (!notebookId || !question) {
+    if (!sourceCorpusId || !question) {
-      res.status(400).json({ error: 'notebookId and question are required' });
+      res.status(400).json({ error: 'sourceCorpusId and question are required' });
       return;
     }
 
-    logger.info({ notebookId, question }, 'query received');
+    logger.info({ sourceCorpusId, question }, 'query received');
 
     const [queryEmbedding]: number[][] = await embedTexts([question], 'query');
 
-    const searchResults: ScoredChunk[] = search(queryEmbedding, notebookId, TOP_K_SEARCH);
+    const searchResults: ScoredChunk[] = search(queryEmbedding, sourceCorpusId, TOP_K_SEARCH);
     if (searchResults.length === 0) {
       res.json({
-        answer: 'No sources found for this notebook. Upload some documents first.',
+        answer: 'No sources found for this source corpus. Upload some documents first.',
         citations: [],
         groundednessScore: null,
         followUpQuestions: [],
@@ -69,7 +69,7 @@ router.post('/', async (req: Request<unknown, unknown, QueryBody>, res: Response
       'retrieval complete'
     );
 
-    const sourceGroups: SourceGroup[] = notebookStore.buildSourceGroups(notebookId, topChunks);
+    const sourceGroups: SourceGroup[] = sourceCorpusStore.buildSourceGroups(sourceCorpusId, topChunks);
 
     const { answer, citedSourceIndices, followUpQuestions }: GenerationResult = await generate(question, sourceGroups);
 

server/src/routes/sourceCorpus.ts

@@ -2,33 +2,33 @@
 
 import { Router, type Request, type Response } from 'express';
 import { v4 as uuidv4 } from 'uuid';
-import * as notebookStore from '../stores/notebookStore.js';
+import * as sourceCorpusStore from '../stores/sourceCorpusStore.js';
 import { deleteVectorsForChunks } from '../stores/vectorStore.js';
 
 const router = Router();
 
 router.get('/', (_req: Request, res: Response) => {
-  res.json(notebookStore.getAllNotebooks());
+  res.json(sourceCorpusStore.getAllSourceCorpora());
 });
 
-interface CreateNotebookBody {
+interface CreateSourceCorpusBody {
   name?: string;
 }
 
-router.post('/', (req: Request<unknown, unknown, CreateNotebookBody>, res: Response) => {
+router.post('/', (req: Request<unknown, unknown, CreateSourceCorpusBody>, res: Response) => {
   const { name } = req.body;
   if (!name || !name.trim()) {
     res.status(400).json({ error: 'name is required' });
     return;
   }
 
-  const notebook = notebookStore.createNotebook({
+  const sourceCorpus = sourceCorpusStore.createSourceCorpus({
     id: uuidv4(),
     name: name.trim(),
     createdAt: new Date().toISOString(),
   });
 
-  res.status(201).json(notebook);
+  res.status(201).json(sourceCorpus);
 });
 
 interface DeleteParams {
@@ -36,10 +36,10 @@ interface DeleteParams {
 }
 
 router.delete('/:id', (req: Request<DeleteParams>, res: Response) => {
-  const chunks = notebookStore.getChunksForNotebook(req.params.id);
+  const chunks = sourceCorpusStore.getChunksForSourceCorpus(req.params.id);
-  const deleted = notebookStore.deleteNotebook(req.params.id);
+  const deleted = sourceCorpusStore.deleteSourceCorpus(req.params.id);
   if (!deleted) {
-    res.status(404).json({ error: 'notebook not found' });
+    res.status(404).json({ error: 'source corpus not found' });
     return;
   }
   if (chunks.length) {

server/src/routes/sources.ts

@@ -4,18 +4,18 @@ import { Router, type Request, type Response, type NextFunction } from 'express'
 import multer from 'multer';
 import { v4 as uuidv4 } from 'uuid';
 import logger from '../logger.js';
-import * as notebookStore from '../stores/notebookStore.js';
+import * as sourceCorpusStore from '../stores/sourceCorpusStore.js';
-import type { Source } from '../stores/notebookStore.js';
+import type { Source } from '../stores/sourceCorpusStore.js';
 import { parseFile, chunkText, parseUrl, parseYoutubeUrl, isYoutubeUrl } from '../services/sourceService.js';
 import type { TextChunk } from '../services/sourceService.js';
 import { embedTexts, storeChunkEmbeddings } from '../services/retrievalService.js';
 import { triggerPreGeneration } from '../services/preGenerationService.js';
 import {
-  requireNotebookId,
+  requireSourceCorpusId,
-  requireNotebook,
+  requireSourceCorpus,
   requireFile,
   requireUrl,
-  type NotebookRequest,
+  type SourceCorpusRequest,
 } from '../middleware/validation.js';
 
 const upload = multer({ storage: multer.memoryStorage(), limits: { fileSize: 50 * 1024 * 1024 } });
@@ -26,8 +26,8 @@ function cleanFilename(name: string): string {
   return name.replace(TIMESTAMP_RE, '');
 }
 
-router.get('/', requireNotebookId, (req: NotebookRequest, res: Response) => {
+router.get('/', requireSourceCorpusId, (req: SourceCorpusRequest, res: Response) => {
-  res.json(notebookStore.getSources(req.notebookId!));
+  res.json(sourceCorpusStore.getSources(req.sourceCorpusId!));
 });
 
 function multerUpload(req: Request, res: Response, next: NextFunction): void {
@@ -47,10 +47,10 @@ function multerUpload(req: Request, res: Response, next: NextFunction): void {
 router.post(
   '/',
   multerUpload,
-  requireNotebookId,
+  requireSourceCorpusId,
-  requireNotebook,
+  requireSourceCorpus,
   requireFile,
-  async (req: NotebookRequest, res: Response, next: NextFunction) => {
+  async (req: SourceCorpusRequest, res: Response, next: NextFunction) => {
     try {
       const sourceId: string = uuidv4();
       const rawName: string = Buffer.from(req.file!.originalname, 'latin1').toString('utf-8');
@@ -67,13 +67,13 @@ router.post(
         'parsed and chunked source'
       );
 
-      notebookStore.addChunksToNotebook(req.notebookId!, chunks);
+      sourceCorpusStore.addChunksToSourceCorpus(req.sourceCorpusId!, chunks);
 
       const texts: string[] = chunks.map((c) => c.text);
       const embeddings: number[][] = await embedTexts(texts, 'document');
       storeChunkEmbeddings(chunks, embeddings);
 
-      const source: Source | null = notebookStore.addSource(req.notebookId!, {
+      const source: Source | null = sourceCorpusStore.addSource(req.sourceCorpusId!, {
         id: sourceId,
         name: displayName,
         mimetype: req.file!.mimetype,
@@ -81,7 +81,7 @@ router.post(
         uploadedAt: new Date().toISOString(),
       });
 
-      triggerPreGeneration(req.notebookId!);
+      triggerPreGeneration(req.sourceCorpusId!);
 
       res.status(201).json(source);
     } catch (err) {
@@ -96,10 +96,10 @@ interface UrlBody {
 
 router.post(
   '/url',
-  requireNotebookId,
+  requireSourceCorpusId,
-  requireNotebook,
+  requireSourceCorpus,
   requireUrl,
-  async (req: NotebookRequest & Request<unknown, unknown, UrlBody>, res: Response, next: NextFunction) => {
+  async (req: SourceCorpusRequest & Request<unknown, unknown, UrlBody>, res: Response, next: NextFunction) => {
     try {
       const { url } = req.body;
       const sourceId: string = uuidv4();
@@ -116,13 +116,13 @@ router.post(
         return;
       }
 
-      notebookStore.addChunksToNotebook(req.notebookId!, chunks);
+      sourceCorpusStore.addChunksToSourceCorpus(req.sourceCorpusId!, chunks);
 
       const texts: string[] = chunks.map((c) => c.text);
       const embeddings: number[][] = await embedTexts(texts, 'document');
       storeChunkEmbeddings(chunks, embeddings);
 
-      const source: Source | null = notebookStore.addSource(req.notebookId!, {
+      const source: Source | null = sourceCorpusStore.addSource(req.sourceCorpusId!, {
         id: sourceId,
         name: displayName,
         mimetype: isYT ? 'video/youtube' : 'text/html',
@@ -130,7 +130,7 @@ router.post(
         uploadedAt: new Date().toISOString(),
       });
 
-      triggerPreGeneration(req.notebookId!);
+      triggerPreGeneration(req.sourceCorpusId!);
 
       res.status(201).json(source);
     } catch (err) {

server/src/services/documentService.ts

@@ -104,11 +104,11 @@ export async function generateStudyGuide(sourceGroups: SourceGroup[]): Promise<S
   const sources = buildSourceBlock(sourceGroups);
   const start = Date.now();
 
-  const prompt = `You are an expert educator. Given the source documents below, produce a comprehensive study guide. Follow these rules:
+  const prompt = `You are an expert reasearch assistant. Given the source documents below, produce a comprehensive guide. Follow these rules:
 
 1. Create a structured outline of the main ideas organized into logical sections.
 2. For each section, provide: bullet-point key concepts, key terms with definitions, and 2-3 self-review questions.
-3. At the end, provide mnemonic devices or simplified restatements to help memorize the hardest concepts.
+3. At the end, provide mnemonic devices or simplified restatements of the hardest concepts.
 4. Be concise but thorough. Use simple, clear language.
 
 --- SOURCE DOCUMENTS ---

server/src/services/preGenerationService.test.ts

@@ -1,9 +1,9 @@
 import { describe, it, expect, vi, beforeEach, afterEach, type Mock } from 'vitest';
 
-vi.mock('../stores/notebookStore.js', () => ({
+vi.mock('../stores/sourceCorpusStore.js', () => ({
-  getNotebook: vi.fn(),
+  getSourceCorpus: vi.fn(),
   getSources: vi.fn(),
-  getChunksForNotebook: vi.fn(),
+  getChunksForSourceCorpus: vi.fn(),
   buildSourceGroups: vi.fn(),
 }));
 
@@ -26,14 +26,14 @@ vi.mock('../logger.js', () => ({
 }));
 
 import { triggerPreGeneration } from './preGenerationService.js';
-import * as notebookStore from '../stores/notebookStore.js';
+import * as sourceCorpusStore from '../stores/sourceCorpusStore.js';
 import * as documentCacheStore from '../stores/documentCacheStore.js';
 import { generateStudyGuide, generateFaq, generateExecutiveBrief } from './documentService.js';
 
-const mockedGetNotebook = notebookStore.getNotebook as Mock;
+const mockedGetSourceCorpus = sourceCorpusStore.getSourceCorpus as Mock;
-const mockedGetSources = notebookStore.getSources as Mock;
+const mockedGetSources = sourceCorpusStore.getSources as Mock;
-const mockedGetChunksForNotebook = notebookStore.getChunksForNotebook as Mock;
+const mockedGetChunksForSourceCorpus = sourceCorpusStore.getChunksForSourceCorpus as Mock;
-const mockedBuildSourceGroups = notebookStore.buildSourceGroups as Mock;
+const mockedBuildSourceGroups = sourceCorpusStore.buildSourceGroups as Mock;
 const mockedIsGenerating = documentCacheStore.isGenerating as Mock;
 const mockedInvalidate = documentCacheStore.invalidate as Mock;
 const mockedMarkGenerating = documentCacheStore.markGenerating as Mock;
@@ -43,10 +43,10 @@ const mockedGenerateStudyGuide = generateStudyGuide as Mock;
 const mockedGenerateFaq = generateFaq as Mock;
 const mockedGenerateExecutiveBrief = generateExecutiveBrief as Mock;
 
-function setupNotebook(id: string): void {
+function setupSourceCorpus(id: string): void {
-  mockedGetNotebook.mockReturnValue({ id });
+  mockedGetSourceCorpus.mockReturnValue({ id });
   mockedGetSources.mockReturnValue([{ id: 's1' }, { id: 's2' }]);
-  mockedGetChunksForNotebook.mockReturnValue([{ id: 'c1', text: 'hello' }]);
+  mockedGetChunksForSourceCorpus.mockReturnValue([{ id: 'c1', text: 'hello' }]);
   mockedBuildSourceGroups.mockReturnValue([{ docIndex: 1, name: 'Doc', chunks: [{ text: 'hello' }] }]);
 }
 
@@ -66,14 +66,14 @@ afterEach(() => {
 });
 
 describe('triggerPreGeneration guards', () => {
-  it('does nothing if the notebook does not exist', () => {
+  it('does nothing if the sourceCorpus does not exist', () => {
-    mockedGetNotebook.mockReturnValue(null);
+    mockedGetSourceCorpus.mockReturnValue(null);
     triggerPreGeneration('nb-missing');
     expect(mockedGetSources).not.toHaveBeenCalled();
   });
 
   it('does nothing if fewer than 2 sources', () => {
-    mockedGetNotebook.mockReturnValue({ id: 'nb-few' });
+    mockedGetSourceCorpus.mockReturnValue({ id: 'nb-few' });
     mockedGetSources.mockReturnValue([{ id: 's1' }]);
     triggerPreGeneration('nb-few');
     expect(mockedMarkGenerating).not.toHaveBeenCalled();
@@ -82,7 +82,7 @@ describe('triggerPreGeneration guards', () => {
 
 describe('queuing when already generating', () => {
   it('invalidates cache and skips runPreGeneration', () => {
-    setupNotebook('nb-q');
+    setupSourceCorpus('nb-q');
     mockedIsGenerating.mockReturnValue(true);
 
     triggerPreGeneration('nb-q');
@@ -94,7 +94,7 @@ describe('queuing when already generating', () => {
 
 describe('debounce', () => {
   it('does not run generation immediately', () => {
-    setupNotebook('nb-debounce');
+    setupSourceCorpus('nb-debounce');
     mockedIsGenerating.mockReturnValue(false);
     stubGeneratorsOk();
 
@@ -104,7 +104,7 @@ describe('debounce', () => {
   });
 
   it('runs generation after the debounce delay', async () => {
-    setupNotebook('nb-delay');
+    setupSourceCorpus('nb-delay');
     mockedIsGenerating.mockReturnValue(false);
     stubGeneratorsOk();
 
@@ -119,7 +119,7 @@ describe('debounce', () => {
   });
 
   it('resets the timer on repeated calls, running generation only once', async () => {
-    setupNotebook('nb-batch');
+    setupSourceCorpus('nb-batch');
     mockedIsGenerating.mockReturnValue(false);
     stubGeneratorsOk();
 
@@ -140,7 +140,7 @@ describe('debounce', () => {
 
 describe('runPreGeneration (via triggerPreGeneration)', () => {
   it('runs all three generators and caches results', async () => {
-    setupNotebook('nb-happy');
+    setupSourceCorpus('nb-happy');
     mockedIsGenerating.mockReturnValue(false);
     stubGeneratorsOk();
 
@@ -158,7 +158,7 @@ describe('runPreGeneration (via triggerPreGeneration)', () => {
   });
 
   it('marks generating before starting and clears it after', async () => {
-    setupNotebook('nb-flag');
+    setupSourceCorpus('nb-flag');
     mockedIsGenerating.mockReturnValue(false);
     stubGeneratorsOk();
 
@@ -173,7 +173,7 @@ describe('runPreGeneration (via triggerPreGeneration)', () => {
   });
 
   it('still clears generating flag when a generator fails', async () => {
-    setupNotebook('nb-partial');
+    setupSourceCorpus('nb-partial');
     mockedIsGenerating.mockReturnValue(false);
     mockedGenerateStudyGuide.mockRejectedValue(new Error('boom'));
     mockedGenerateFaq.mockResolvedValue({ subject: 'ok' });
@@ -190,9 +190,9 @@ describe('runPreGeneration (via triggerPreGeneration)', () => {
   });
 });
 
-describe('re-trigger for queued notebooks', () => {
+describe('re-trigger for queued sourceCorpora', () => {
   it('runs a second generation cycle after the first finishes', async () => {
-    setupNotebook('nb-re');
+    setupSourceCorpus('nb-re');
     mockedIsGenerating.mockReturnValueOnce(false).mockReturnValueOnce(true);
 
     let resolveFirst: (value: { title: string }) => void;

server/src/services/preGenerationService.ts

@@ -1,7 +1,7 @@
 'use strict';
 
 import logger from '../logger.js';
-import * as notebookStore from '../stores/notebookStore.js';
+import * as sourceCorpusStore from '../stores/sourceCorpusStore.js';
 import * as documentCacheStore from '../stores/documentCacheStore.js';
 import {
   generateStudyGuide,
@@ -29,45 +29,45 @@ const DEBOUNCE_MS = 5000;
 const pendingReGen = new Set<string>();
 const debounceTimers = new Map<string, ReturnType<typeof setTimeout>>();
 
-export function triggerPreGeneration(notebookId: string): void {
+export function triggerPreGeneration(sourceCorpusId: string): void {
-  const notebook = notebookStore.getNotebook(notebookId);
+  const sourceCorpus = sourceCorpusStore.getSourceCorpus(sourceCorpusId);
-  if (!notebook) return;
+  if (!sourceCorpus) return;
 
-  const sources = notebookStore.getSources(notebookId);
+  const sources = sourceCorpusStore.getSources(sourceCorpusId);
   if (sources.length < MIN_SOURCES) return;
 
-  if (documentCacheStore.isGenerating(notebookId)) {
+  if (documentCacheStore.isGenerating(sourceCorpusId)) {
-    pendingReGen.add(notebookId);
+    pendingReGen.add(sourceCorpusId);
-    documentCacheStore.invalidate(notebookId);
+    documentCacheStore.invalidate(sourceCorpusId);
-    logger.debug({ notebookId }, 'pre-generation in progress, queued re-generation');
+    logger.debug({ sourceCorpusId }, 'pre-generation in progress, queued re-generation');
     return;
   }
 
-  const existingTimer = debounceTimers.get(notebookId);
+  const existingTimer = debounceTimers.get(sourceCorpusId);
   if (existingTimer !== undefined) {
     clearTimeout(existingTimer);
   }
   debounceTimers.set(
-    notebookId,
+    sourceCorpusId,
     setTimeout(() => {
-      debounceTimers.delete(notebookId);
+      debounceTimers.delete(sourceCorpusId);
-      runPreGeneration(notebookId);
+      runPreGeneration(sourceCorpusId);
     }, DEBOUNCE_MS)
   );
-  logger.debug({ notebookId, debounceMs: DEBOUNCE_MS }, 'pre-generation debounced');
+  logger.debug({ sourceCorpusId, debounceMs: DEBOUNCE_MS }, 'pre-generation debounced');
 }
 
-function runPreGeneration(notebookId: string): void {
+function runPreGeneration(sourceCorpusId: string): void {
   try {
-    const sources = notebookStore.getSources(notebookId);
+    const sources = sourceCorpusStore.getSources(sourceCorpusId);
-    const chunks = notebookStore.getChunksForNotebook(notebookId);
+    const chunks = sourceCorpusStore.getChunksForSourceCorpus(sourceCorpusId);
-    const sourceGroups = notebookStore.buildSourceGroups(notebookId, chunks) as SourceGroup[];
+    const sourceGroups = sourceCorpusStore.buildSourceGroups(sourceCorpusId, chunks) as SourceGroup[];
 
-    documentCacheStore.invalidate(notebookId);
+    documentCacheStore.invalidate(sourceCorpusId);
-    documentCacheStore.markGenerating(notebookId);
+    documentCacheStore.markGenerating(sourceCorpusId);
 
     logger.info(
-      { notebookId, sourceCount: sources.length, chunkCount: chunks.length },
+      { sourceCorpusId, sourceCount: sources.length, chunkCount: chunks.length },
       'background pre-generation started'
     );
 
@@ -75,31 +75,31 @@ function runPreGeneration(notebookId: string): void {
       async ([type, generator]) => {
         try {
           const document = await generator(sourceGroups);
-          documentCacheStore.setCachedDocument(notebookId, type, document, sources);
+          documentCacheStore.setCachedDocument(sourceCorpusId, type, document, sources);
-          logger.info({ notebookId, type }, 'background pre-generation complete for type');
+          logger.info({ sourceCorpusId, type }, 'background pre-generation complete for type');
         } catch (err) {
           const error = err as Error;
-          logger.error({ notebookId, type, err: error.message }, 'background pre-generation failed for type');
+          logger.error({ sourceCorpusId, type, err: error.message }, 'background pre-generation failed for type');
         }
       }
     );
 
     Promise.all(jobs)
       .then(() => {
-        logger.info({ notebookId }, 'all background pre-generation complete');
+        logger.info({ sourceCorpusId }, 'all background pre-generation complete');
       })
       .finally(() => {
-        documentCacheStore.clearGenerating(notebookId);
+        documentCacheStore.clearGenerating(sourceCorpusId);
 
-        if (pendingReGen.has(notebookId)) {
+        if (pendingReGen.has(sourceCorpusId)) {
-          pendingReGen.delete(notebookId);
+          pendingReGen.delete(sourceCorpusId);
-          logger.info({ notebookId }, 're-triggering pre-generation for updated sources');
+          logger.info({ sourceCorpusId }, 're-triggering pre-generation for updated sources');
-          runPreGeneration(notebookId);
+          runPreGeneration(sourceCorpusId);
         }
       });
   } catch (err) {
     const error = err as Error;
-    logger.error({ notebookId, err: error.message }, 'pre-generation setup failed');
+    logger.error({ sourceCorpusId, err: error.message }, 'pre-generation setup failed');
-    documentCacheStore.clearGenerating(notebookId);
+    documentCacheStore.clearGenerating(sourceCorpusId);
   }
 }

server/src/services/retrievalService.ts

@@ -2,7 +2,7 @@
 
 import logger from '../logger.js';
 import * as vectorStore from '../stores/vectorStore.js';
-import * as notebookStore from '../stores/notebookStore.js';
+import * as sourceCorpusStore from '../stores/sourceCorpusStore.js';
 
 const VOYAGE_API_URL = 'https://api.voyageai.com/v1';
 const EMBED_MODEL = 'voyage-3';
@@ -72,8 +72,8 @@ export function storeChunkEmbeddings(chunks: TextChunk[], embeddings: number[][]
   logger.debug({ count: chunks.length }, 'stored chunk embeddings');
 }
 
-export function search(queryEmbedding: number[], notebookId: string, topK = 10): ScoredChunk[] {
+export function search(queryEmbedding: number[], sourceCorpusId: string, topK = 10): ScoredChunk[] {
-  const chunks = notebookStore.getChunksForNotebook(notebookId) as TextChunk[];
+  const chunks = sourceCorpusStore.getChunksForSourceCorpus(sourceCorpusId) as TextChunk[];
   if (chunks.length === 0) return [];
 
   const scored: ScoredChunk[] = [];

server/src/services/sourceService.ts

@@ -136,7 +136,7 @@ export async function parseUrl(url: string): Promise<string> {
 
   const res = await fetch(safeUrl, {
     headers: {
-      'User-Agent': 'Mozilla/5.0 (compatible; NotebookClone/1.0)',
+      'User-Agent': 'Mozilla/5.0 (compatible; SourceSentinel/1.0)',
       Accept: 'text/html,application/xhtml+xml,text/plain',
     },
     signal: AbortSignal.timeout(15000),

server/src/stores/documentCacheStore.test.ts

@@ -57,7 +57,7 @@ describe('documentCacheStore', () => {
   });
 
   describe('invalidate', () => {
-    it('removes all entries for a notebook', () => {
+    it('removes all entries for a sourceCorpus', () => {
       setCachedDocument('inv-1', 'faq', { a: 1 }, [{ id: 'x' }]);
       setCachedDocument('inv-1', 'study-guide', { b: 2 }, [{ id: 'x' }]);
       invalidate('inv-1');
@@ -65,7 +65,7 @@ describe('documentCacheStore', () => {
       expect(getCachedDocument('inv-1', 'study-guide')).toBeNull();
     });
 
-    it('does not affect other notebooks', () => {
+    it('does not affect other sourceCorpora', () => {
       setCachedDocument('inv-a', 'faq', { a: 1 }, [{ id: 'x' }]);
       setCachedDocument('inv-b', 'faq', { b: 2 }, [{ id: 'x' }]);
       invalidate('inv-a');
@@ -86,7 +86,7 @@ describe('documentCacheStore', () => {
       expect(isGenerating('gen-cycle')).toBe(false);
     });
 
-    it('is cleared when the notebook is invalidated', () => {
+    it('is cleared when the sourceCorpus is invalidated', () => {
       markGenerating('gen-inv');
       invalidate('gen-inv');
       expect(isGenerating('gen-inv')).toBe(false);

server/src/stores/documentCacheStore.ts

@@ -19,19 +19,19 @@ function buildSourceHash(sources: CacheSource[]): string {
     .join('|');
 }
 
-export function getCachedDocument(notebookId: string, type: string): CacheEntry | null {
+export function getCachedDocument(sourceCorpusId: string, type: string): CacheEntry | null {
-  const entry = cache.get(`${notebookId}:${type}`);
+  const entry = cache.get(`${sourceCorpusId}:${type}`);
   if (!entry || typeof entry === 'boolean') return null;
   return entry;
 }
 
 export function setCachedDocument(
-  notebookId: string,
+  sourceCorpusId: string,
   type: string,
   document: unknown,
   sources: CacheSource[]
 ): void {
-  const key = `${notebookId}:${type}`;
+  const key = `${sourceCorpusId}:${type}`;
   cache.set(key, {
     document,
     sourceHash: buildSourceHash(sources),
@@ -39,29 +39,29 @@ export function setCachedDocument(
   });
 }
 
-export function isFresh(notebookId: string, type: string, currentSources: CacheSource[]): boolean {
+export function isFresh(sourceCorpusId: string, type: string, currentSources: CacheSource[]): boolean {
-  const entry = cache.get(`${notebookId}:${type}`);
+  const entry = cache.get(`${sourceCorpusId}:${type}`);
   if (!entry || typeof entry === 'boolean') return false;
   return entry.sourceHash === buildSourceHash(currentSources);
 }
 
-export function invalidate(notebookId: string): void {
+export function invalidate(sourceCorpusId: string): void {
   for (const key of cache.keys()) {
-    if (key.startsWith(`${notebookId}:`)) {
+    if (key.startsWith(`${sourceCorpusId}:`)) {
       cache.delete(key);
     }
   }
 }
 
-export function markGenerating(notebookId: string): void {
+export function markGenerating(sourceCorpusId: string): void {
-  const key = `${notebookId}:__generating`;
+  const key = `${sourceCorpusId}:__generating`;
   cache.set(key, true);
 }
 
-export function clearGenerating(notebookId: string): void {
+export function clearGenerating(sourceCorpusId: string): void {
-  cache.delete(`${notebookId}:__generating`);
+  cache.delete(`${sourceCorpusId}:__generating`);
 }
 
-export function isGenerating(notebookId: string): boolean {
+export function isGenerating(sourceCorpusId: string): boolean {
-  return cache.get(`${notebookId}:__generating`) === true;
+  return cache.get(`${sourceCorpusId}:__generating`) === true;
 }

server/src/stores/notebookStore.test.ts

@@ -1,65 +0,0 @@
-import { describe, it, expect, beforeEach } from 'vitest';
-import { NotebookStore } from './notebookStore.js';
-
-describe('notebookStore', () => {
-  let store: NotebookStore;
-
-  beforeEach(() => {
-    store = new NotebookStore();
-  });
-
-  it('creates and retrieves a notebook', () => {
-    const nb = store.createNotebook({ id: 'nb-1', name: 'Test', createdAt: '2026-01-01' });
-    expect(nb.id).toBe('nb-1');
-    expect(nb.name).toBe('Test');
-
-    const found = store.getNotebook('nb-1');
-    expect(found).not.toBeNull();
-    expect(found!.name).toBe('Test');
-  });
-
-  it('lists all notebooks without chunks', () => {
-    store.createNotebook({ id: 'nb-1', name: 'A', createdAt: '2026-01-01' });
-    store.createNotebook({ id: 'nb-2', name: 'B', createdAt: '2026-01-02' });
-    const all = store.getAllNotebooks();
-    expect(all).toHaveLength(2);
-    expect(all[0]).not.toHaveProperty('chunks');
-  });
-
-  it('deletes a notebook', () => {
-    store.createNotebook({ id: 'nb-1', name: 'A', createdAt: '2026-01-01' });
-    expect(store.deleteNotebook('nb-1')).toBe(true);
-    expect(store.getNotebook('nb-1')).toBeNull();
-  });
-
-  it('returns false when deleting a non-existent notebook', () => {
-    expect(store.deleteNotebook('nope')).toBe(false);
-  });
-
-  it('adds and retrieves sources', () => {
-    store.createNotebook({ id: 'nb-1', name: 'A', createdAt: '2026-01-01' });
-    store.addSource('nb-1', { id: 's-1', name: 'doc.pdf' });
-    const sources = store.getSources('nb-1');
-    expect(sources).toHaveLength(1);
-    expect(sources[0].name).toBe('doc.pdf');
-  });
-
-  it('returns empty sources for non-existent notebook', () => {
-    expect(store.getSources('nope')).toEqual([]);
-  });
-
-  it('adds and retrieves chunks', () => {
-    store.createNotebook({ id: 'nb-1', name: 'A', createdAt: '2026-01-01' });
-    store.addChunksToNotebook('nb-1', [
-      { id: 'c-1', text: 'chunk one', sourceId: 's-1', index: 0 },
-      { id: 'c-2', text: 'chunk two', sourceId: 's-1', index: 1 },
-    ]);
-    const chunks = store.getChunksForNotebook('nb-1');
-    expect(chunks).toHaveLength(2);
-    expect(chunks[0].text).toBe('chunk one');
-  });
-
-  it('returns empty chunks for non-existent notebook', () => {
-    expect(store.getChunksForNotebook('nope')).toEqual([]);
-  });
-});

server/src/stores/notebookStore.ts

@@ -1,126 +0,0 @@
-'use strict';
-
-export interface TextChunk {
-  id: string;
-  text: string;
-  sourceId: string;
-  index: number;
-}
-
-export interface Source {
-  id: string;
-  name: string;
-  mimetype?: string;
-  chunkCount?: number;
-  uploadedAt?: string;
-}
-
-export interface Notebook {
-  id: string;
-  name: string;
-  createdAt: string;
-  sources: Source[];
-  chunks: TextChunk[];
-}
-
-export interface NotebookMeta {
-  id: string;
-  name: string;
-  createdAt: string;
-}
-
-export interface SourceGroup {
-  docIndex: number;
-  sourceId: string;
-  name: string;
-  chunks: TextChunk[];
-}
-
-export class NotebookStore {
-  private notebooks = new Map<string, Notebook>();
-
-  getAllNotebooks(): NotebookMeta[] {
-    return Array.from(this.notebooks.values()).map(({ id, name, createdAt }) => ({
-      id,
-      name,
-      createdAt,
-    }));
-  }
-
-  getNotebook(id: string): Notebook | null {
-    return this.notebooks.get(id) || null;
-  }
-
-  createNotebook(notebook: { id: string; name: string; createdAt: string }): NotebookMeta {
-    const record: Notebook = { ...notebook, sources: [], chunks: [] };
-    this.notebooks.set(record.id, record);
-    return { id: record.id, name: record.name, createdAt: record.createdAt };
-  }
-
-  deleteNotebook(id: string): boolean {
-    return this.notebooks.delete(id);
-  }
-
-  addSource(notebookId: string, source: Source): Source | null {
-    const notebook = this.notebooks.get(notebookId);
-    if (!notebook) return null;
-    notebook.sources.push(source);
-    return source;
-  }
-
-  getSources(notebookId: string): Source[] {
-    const notebook = this.notebooks.get(notebookId);
-    if (!notebook) return [];
-    return notebook.sources;
-  }
-
-  addChunksToNotebook(notebookId: string, chunks: TextChunk[]): Notebook | null {
-    const notebook = this.notebooks.get(notebookId);
-    if (!notebook) return null;
-    notebook.chunks = notebook.chunks.concat(chunks);
-    return notebook;
-  }
-
-  getChunksForNotebook(notebookId: string): TextChunk[] {
-    const notebook = this.notebooks.get(notebookId);
-    if (!notebook) return [];
-    return notebook.chunks;
-  }
-
-  buildSourceGroups(notebookId: string, chunks: TextChunk[]): SourceGroup[] {
-    const sources = this.getSources(notebookId);
-    const sourceIndexMap = new Map<string, number>();
-    sources.forEach((src, i) => {
-      sourceIndexMap.set(src.id, i + 1);
-    });
-
-    const groupMap = new Map<string, SourceGroup>();
-    for (const chunk of chunks) {
-      const docIndex = sourceIndexMap.get(chunk.sourceId) || 0;
-      if (!groupMap.has(chunk.sourceId)) {
-        const src = sources.find((s) => s.id === chunk.sourceId);
-        groupMap.set(chunk.sourceId, {
-          docIndex,
-          sourceId: chunk.sourceId,
-          name: src?.name || 'Unknown',
-          chunks: [],
-        });
-      }
-      groupMap.get(chunk.sourceId)!.chunks.push(chunk);
-    }
-
-    return Array.from(groupMap.values()).sort((a, b) => a.docIndex - b.docIndex);
-  }
-}
-
-const defaultStore = new NotebookStore();
-
-export const getAllNotebooks = defaultStore.getAllNotebooks.bind(defaultStore);
-export const getNotebook = defaultStore.getNotebook.bind(defaultStore);
-export const createNotebook = defaultStore.createNotebook.bind(defaultStore);
-export const deleteNotebook = defaultStore.deleteNotebook.bind(defaultStore);
-export const addSource = defaultStore.addSource.bind(defaultStore);
-export const getSources = defaultStore.getSources.bind(defaultStore);
-export const addChunksToNotebook = defaultStore.addChunksToNotebook.bind(defaultStore);
-export const getChunksForNotebook = defaultStore.getChunksForNotebook.bind(defaultStore);
-export const buildSourceGroups = defaultStore.buildSourceGroups.bind(defaultStore);

server/src/stores/sourceCorpusStore.test.ts

@@ -0,0 +1,65 @@
+import { describe, it, expect, beforeEach } from 'vitest';
+import { SourceCorpusStore } from './sourceCorpusStore.js';
+
+describe('sourceCorpusStore', () => {
+  let store: SourceCorpusStore;
+
+  beforeEach(() => {
+    store = new SourceCorpusStore();
+  });
+
+  it('creates and retrieves a sourceCorpus', () => {
+    const corpus = store.createSourceCorpus({ id: 'nb-1', name: 'Test', createdAt: '2026-01-01' });
+    expect(corpus.id).toBe('nb-1');
+    expect(corpus.name).toBe('Test');
+
+    const found = store.getSourceCorpus('nb-1');
+    expect(found).not.toBeNull();
+    expect(found!.name).toBe('Test');
+  });
+
+  it('lists all sourceCorpora without chunks', () => {
+    store.createSourceCorpus({ id: 'nb-1', name: 'A', createdAt: '2026-01-01' });
+    store.createSourceCorpus({ id: 'nb-2', name: 'B', createdAt: '2026-01-02' });
+    const all = store.getAllSourceCorpora();
+    expect(all).toHaveLength(2);
+    expect(all[0]).not.toHaveProperty('chunks');
+  });
+
+  it('deletes a sourceCorpus', () => {
+    store.createSourceCorpus({ id: 'nb-1', name: 'A', createdAt: '2026-01-01' });
+    expect(store.deleteSourceCorpus('nb-1')).toBe(true);
+    expect(store.getSourceCorpus('nb-1')).toBeNull();
+  });
+
+  it('returns false when deleting a non-existent sourceCorpus', () => {
+    expect(store.deleteSourceCorpus('nope')).toBe(false);
+  });
+
+  it('adds and retrieves sources', () => {
+    store.createSourceCorpus({ id: 'nb-1', name: 'A', createdAt: '2026-01-01' });
+    store.addSource('nb-1', { id: 's-1', name: 'doc.pdf' });
+    const sources = store.getSources('nb-1');
+    expect(sources).toHaveLength(1);
+    expect(sources[0].name).toBe('doc.pdf');
+  });
+
+  it('returns empty sources for non-existent sourceCorpus', () => {
+    expect(store.getSources('nope')).toEqual([]);
+  });
+
+  it('adds and retrieves chunks', () => {
+    store.createSourceCorpus({ id: 'nb-1', name: 'A', createdAt: '2026-01-01' });
+    store.addChunksToSourceCorpus('nb-1', [
+      { id: 'c-1', text: 'chunk one', sourceId: 's-1', index: 0 },
+      { id: 'c-2', text: 'chunk two', sourceId: 's-1', index: 1 },
+    ]);
+    const chunks = store.getChunksForSourceCorpus('nb-1');
+    expect(chunks).toHaveLength(2);
+    expect(chunks[0].text).toBe('chunk one');
+  });
+
+  it('returns empty chunks for non-existent sourceCorpus', () => {
+    expect(store.getChunksForSourceCorpus('nope')).toEqual([]);
+  });
+});

server/src/stores/sourceCorpusStore.ts

@@ -0,0 +1,126 @@
+'use strict';
+
+export interface TextChunk {
+  id: string;
+  text: string;
+  sourceId: string;
+  index: number;
+}
+
+export interface Source {
+  id: string;
+  name: string;
+  mimetype?: string;
+  chunkCount?: number;
+  uploadedAt?: string;
+}
+
+export interface SourceCorpus {
+  id: string;
+  name: string;
+  createdAt: string;
+  sources: Source[];
+  chunks: TextChunk[];
+}
+
+export interface SourceCorpusMeta {
+  id: string;
+  name: string;
+  createdAt: string;
+}
+
+export interface SourceGroup {
+  docIndex: number;
+  sourceId: string;
+  name: string;
+  chunks: TextChunk[];
+}
+
+export class SourceCorpusStore {
+  private sourceCorpora = new Map<string, SourceCorpus>();
+
+  getAllSourceCorpora(): SourceCorpusMeta[] {
+    return Array.from(this.sourceCorpora.values()).map(({ id, name, createdAt }) => ({
+      id,
+      name,
+      createdAt,
+    }));
+  }
+
+  getSourceCorpus(id: string): SourceCorpus | null {
+    return this.sourceCorpora.get(id) || null;
+  }
+
+  createSourceCorpus(sourceCorpus: { id: string; name: string; createdAt: string }): SourceCorpusMeta {
+    const record: SourceCorpus = { ...sourceCorpus, sources: [], chunks: [] };
+    this.sourceCorpora.set(record.id, record);
+    return { id: record.id, name: record.name, createdAt: record.createdAt };
+  }
+
+  deleteSourceCorpus(id: string): boolean {
+    return this.sourceCorpora.delete(id);
+  }
+
+  addSource(sourceCorpusId: string, source: Source): Source | null {
+    const sourceCorpus = this.sourceCorpora.get(sourceCorpusId);
+    if (!sourceCorpus) return null;
+    sourceCorpus.sources.push(source);
+    return source;
+  }
+
+  getSources(sourceCorpusId: string): Source[] {
+    const sourceCorpus = this.sourceCorpora.get(sourceCorpusId);
+    if (!sourceCorpus) return [];
+    return sourceCorpus.sources;
+  }
+
+  addChunksToSourceCorpus(sourceCorpusId: string, chunks: TextChunk[]): SourceCorpus | null {
+    const sourceCorpus = this.sourceCorpora.get(sourceCorpusId);
+    if (!sourceCorpus) return null;
+    sourceCorpus.chunks = sourceCorpus.chunks.concat(chunks);
+    return sourceCorpus;
+  }
+
+  getChunksForSourceCorpus(sourceCorpusId: string): TextChunk[] {
+    const sourceCorpus = this.sourceCorpora.get(sourceCorpusId);
+    if (!sourceCorpus) return [];
+    return sourceCorpus.chunks;
+  }
+
+  buildSourceGroups(sourceCorpusId: string, chunks: TextChunk[]): SourceGroup[] {
+    const sources = this.getSources(sourceCorpusId);
+    const sourceIndexMap = new Map<string, number>();
+    sources.forEach((src, i) => {
+      sourceIndexMap.set(src.id, i + 1);
+    });
+
+    const groupMap = new Map<string, SourceGroup>();
+    for (const chunk of chunks) {
+      const docIndex = sourceIndexMap.get(chunk.sourceId) || 0;
+      if (!groupMap.has(chunk.sourceId)) {
+        const src = sources.find((s) => s.id === chunk.sourceId);
+        groupMap.set(chunk.sourceId, {
+          docIndex,
+          sourceId: chunk.sourceId,
+          name: src?.name || 'Unknown',
+          chunks: [],
+        });
+      }
+      groupMap.get(chunk.sourceId)!.chunks.push(chunk);
+    }
+
+    return Array.from(groupMap.values()).sort((a, b) => a.docIndex - b.docIndex);
+  }
+}
+
+const defaultStore = new SourceCorpusStore();
+
+export const getAllSourceCorpora = defaultStore.getAllSourceCorpora.bind(defaultStore);
+export const getSourceCorpus = defaultStore.getSourceCorpus.bind(defaultStore);
+export const createSourceCorpus = defaultStore.createSourceCorpus.bind(defaultStore);
+export const deleteSourceCorpus = defaultStore.deleteSourceCorpus.bind(defaultStore);
+export const addSource = defaultStore.addSource.bind(defaultStore);
+export const getSources = defaultStore.getSources.bind(defaultStore);
+export const addChunksToSourceCorpus = defaultStore.addChunksToSourceCorpus.bind(defaultStore);
+export const getChunksForSourceCorpus = defaultStore.getChunksForSourceCorpus.bind(defaultStore);
+export const buildSourceGroups = defaultStore.buildSourceGroups.bind(defaultStore);